Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   I6G43_RS02035 Genome accession   NZ_CP065706
Coordinates   414071..415840 (+) Length   589 a.a.
NCBI ID   WP_038806430.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_886     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 409071..420840
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G43_RS02010 (I6G43_02010) - 409840..410394 (-) 555 WP_038806435.1 GNAT family N-acetyltransferase -
  I6G43_RS02015 (I6G43_02015) - 410504..411874 (+) 1371 WP_038806434.1 MATE family efflux transporter -
  I6G43_RS02020 (I6G43_02020) - 411971..412687 (+) 717 WP_038806433.1 YebC/PmpR family DNA-binding transcriptional regulator -
  I6G43_RS02025 (I6G43_02025) - 412735..413433 (-) 699 WP_038806432.1 DUF308 domain-containing protein -
  I6G43_RS02030 (I6G43_02030) - 413626..414087 (+) 462 WP_038806431.1 MarR family winged helix-turn-helix transcriptional regulator -
  I6G43_RS02035 (I6G43_02035) rcrP 414071..415840 (+) 1770 WP_038806430.1 ABC transporter ATP-binding protein Regulator
  I6G43_RS02040 (I6G43_02040) rcrQ 415830..417590 (+) 1761 WP_038806429.1 ABC transporter ATP-binding protein Regulator
  I6G43_RS02045 (I6G43_02045) - 417687..418190 (+) 504 WP_000800930.1 phosphatase PAP2 family protein -
  I6G43_RS02050 (I6G43_02050) - 418304..418750 (+) 447 WP_000776584.1 LytTR family DNA-binding domain-containing protein -
  I6G43_RS02055 (I6G43_02055) - 418756..419430 (+) 675 WP_000725706.1 LiaF transmembrane domain-containing protein -
  I6G43_RS02060 (I6G43_02060) rpmB 419536..419724 (+) 189 WP_001140948.1 50S ribosomal protein L28 -
  I6G43_RS02065 (I6G43_02065) - 419876..420241 (+) 366 WP_000216441.1 Asp23/Gls24 family envelope stress response protein -

Sequence

Protein


Download         Length: 589 a.a.        Molecular weight: 65383.67 Da        Isoelectric Point: 5.5930

>NTDB_id=513203 I6G43_RS02035 WP_038806430.1 414071..415840(+) (rcrP) [Streptococcus oralis strain FDAARGOS_886]
MKKLAKRITGKEWGMILLTVLFTCFSVYLELEVPTYISQITELLGTSGTQLGELWSPAAKMIGLSLLAFFSSVIVGFFAA
RVAASYTAHLRSDIFNRVLDYSQTEIKRFSIPSLLTRTTNDITQVQMLFTMGLQVVTRGPIMAIWAIGKILGKSEYWLWA
VVVAVIVNVLMTTVLMTLAFPKQSVIQRLTDKLNSITRESLTGIRVVRAYNAEDYQDEKFEVANDEVTRLNLFVNRLMAI
MNPIMMAISSGLSLAIYWIGAYIINDASLTERLPLFSDMVVFMSYAMQVVMGFLLMGALFIVLPRTLVSAGRINQVLDLH
SSIENPSHAQTADPSVQGQVEFRDVTFRYSKNSEAVVEHVTFKAEAGQTVAFIGSTGSGKSTLVNLLPRFYDVSDGEILV
DGVNVQDYDLEDLRNKVGYIPQKAVLFSGDVKGNLDFGKSKETPLSEAAMWQALELAQSKAFIEDKEAGLASEVAQGGTN
FSGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRVLRQELAEKTKSMTKLIVAQRISTIMDADLILVLDQGKVVGQG
THKELLDTNEVYQEIAYSQLSKEELEHGK

Nucleotide


Download         Length: 1770 bp        

>NTDB_id=513203 I6G43_RS02035 WP_038806430.1 414071..415840(+) (rcrP) [Streptococcus oralis strain FDAARGOS_886]
ATGAAGAAACTCGCTAAGCGTATCACAGGAAAAGAGTGGGGAATGATTCTCCTGACTGTCCTCTTTACCTGTTTTTCGGT
CTATCTCGAGTTAGAGGTACCGACTTATATTTCGCAAATTACAGAATTACTGGGAACGTCTGGAACGCAGTTGGGTGAAC
TCTGGTCACCAGCTGCGAAGATGATTGGTTTGTCTTTATTGGCTTTCTTTTCATCTGTTATAGTTGGTTTCTTTGCTGCT
CGTGTTGCAGCATCCTATACGGCTCATTTACGCAGTGATATTTTTAATCGTGTATTGGATTATTCTCAGACAGAAATTAA
ACGTTTCTCTATTCCTAGTCTTTTGACTCGGACAACCAATGATATTACCCAAGTACAGATGCTCTTTACCATGGGCTTGC
AAGTAGTTACTCGTGGGCCAATTATGGCTATCTGGGCCATTGGAAAAATCCTTGGGAAATCGGAATACTGGCTCTGGGCG
GTCGTTGTGGCTGTTATTGTGAACGTTTTGATGACCACTGTTCTCATGACTCTGGCCTTTCCAAAACAATCCGTCATTCA
AAGACTTACAGATAAACTCAATAGCATTACTCGTGAAAGTCTGACAGGGATTCGAGTTGTTCGCGCATACAATGCGGAAG
ATTACCAAGATGAAAAATTTGAAGTAGCCAACGATGAAGTCACTCGTCTCAATCTTTTTGTCAATCGATTGATGGCTATT
ATGAACCCGATTATGATGGCGATTTCCAGTGGACTAAGTTTAGCTATTTACTGGATTGGTGCCTATATCATCAACGATGC
AAGTTTGACAGAACGTCTACCGCTCTTTAGTGATATGGTGGTCTTCATGTCCTATGCTATGCAGGTCGTGATGGGCTTCC
TTCTCATGGGAGCACTCTTTATCGTTCTTCCACGTACCTTGGTTTCGGCAGGACGTATCAATCAAGTATTGGATCTGCAT
TCTTCTATTGAAAATCCTAGTCATGCACAGACAGCGGACCCTTCAGTTCAAGGACAAGTGGAATTCCGTGATGTGACTTT
CCGTTACTCTAAAAACTCAGAAGCAGTCGTGGAACATGTCACTTTCAAAGCAGAAGCGGGTCAAACCGTAGCCTTTATCG
GATCGACTGGATCAGGTAAGTCCACCCTAGTCAACCTCTTGCCTCGTTTTTACGACGTTTCAGATGGAGAAATCCTAGTT
GATGGTGTCAATGTGCAAGATTATGACTTGGAAGATTTACGCAATAAGGTCGGCTATATTCCTCAAAAAGCAGTCCTCTT
TTCTGGAGATGTCAAGGGGAACTTGGACTTTGGTAAGAGCAAAGAAACTCCTCTAAGCGAGGCTGCTATGTGGCAAGCTC
TTGAATTGGCCCAGTCTAAAGCATTTATCGAGGACAAGGAAGCAGGTCTTGCATCAGAAGTAGCCCAAGGTGGAACCAAC
TTCTCAGGAGGTCAAAGACAGCGTTTGGCCATTGCGCGTGCCTTGGCTCGTAAACCAGAGATTCTCATCTTTGATGACTC
TTTCTCAGCTTTGGACTACAAGACGGATCGTGTCCTACGCCAAGAGTTAGCTGAGAAAACAAAATCCATGACCAAGCTCA
TCGTAGCGCAGCGCATTTCTACCATTATGGATGCAGACTTGATCTTAGTATTGGATCAAGGAAAAGTCGTGGGACAAGGC
ACCCACAAGGAGCTTCTAGATACCAACGAAGTCTACCAAGAAATTGCCTATTCACAACTATCGAAGGAGGAATTGGAACA
TGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(358-507)

ABC transporter transmembrane region (ABC_membrane)

(18-292)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

65.724

100

0.671