Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I6G48_RS07620 Genome accession   NZ_CP065695
Coordinates   1608965..1609363 (-) Length   132 a.a.
NCBI ID   WP_012203501.1    Uniprot ID   A0A210VYJ7
Organism   Delftia acidovorans strain FDAARGOS_891     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1603965..1614363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G48_RS07605 (I6G48_07600) - 1605789..1608038 (-) 2250 WP_012203504.1 methyl-accepting chemotaxis protein -
  I6G48_RS07610 (I6G48_07605) - 1608057..1608584 (-) 528 WP_012203503.1 chemotaxis protein CheW -
  I6G48_RS07615 (I6G48_07610) - 1608600..1608965 (-) 366 WP_012203502.1 response regulator -
  I6G48_RS07620 (I6G48_07615) pilG 1608965..1609363 (-) 399 WP_012203501.1 response regulator Regulator
  I6G48_RS07625 (I6G48_07620) - 1609411..1609563 (-) 153 WP_013804031.1 rubredoxin -
  I6G48_RS07630 (I6G48_07625) thiD 1609679..1610635 (+) 957 WP_012203499.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  I6G48_RS07635 (I6G48_07630) hemL 1610696..1612012 (+) 1317 WP_012203498.1 glutamate-1-semialdehyde 2,1-aminomutase -
  I6G48_RS07640 (I6G48_07635) - 1612084..1612482 (-) 399 WP_012203497.1 hypothetical protein -
  I6G48_RS07645 (I6G48_07640) - 1612902..1614089 (-) 1188 WP_012202886.1 IS481 family transposase -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14616.85 Da        Isoelectric Point: 6.9242

>NTDB_id=513065 I6G48_RS07620 WP_012203501.1 1608965..1609363(-) (pilG) [Delftia acidovorans strain FDAARGOS_891]
MTTSGAPLRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFS
DTPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVEQFGKQTIGAL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=513065 I6G48_RS07620 WP_012203501.1 1608965..1609363(-) (pilG) [Delftia acidovorans strain FDAARGOS_891]
GTGACGACATCGGGCGCACCCTTGCGCGTACTCGTGGTGGATGACAGCAATACCATCCGCCGCAGCGCAGAAATCTTCCT
CAAACAGGGCGGGCACGAAGTGCTCCTGGCCGACGACGGCTTCGACGCACTGTCCAAAGTCAACGACTATCAGCCCCAGC
TGATCTTCTGCGACATCCTCATGCCCAAGCTGGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCGCGCTTCTCC
GATACGCCCGTGGTCATGCTCTCGTCCAAGGACGGCGTATTCGACAAGGCGCGCGGGCGCATGGTGGGCTGCCAGGACTA
CCTCACGAAACCCTTCACCAAAGACCAGCTGCTGCAGGCCGTGGAGCAGTTCGGCAAGCAAACCATAGGAGCACTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A210VYJ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.772

86.364

0.508