Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I6G49_RS19735 Genome accession   NZ_CP065693
Coordinates   3953344..3953970 (-) Length   208 a.a.
NCBI ID   WP_023311030.1    Uniprot ID   A0A1Z3N2L7
Organism   Enterobacter asburiae strain FDAARGOS_892     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3948344..3958970
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G49_RS19720 (I6G49_19720) helD 3948581..3950635 (-) 2055 WP_059346437.1 DNA helicase IV -
  I6G49_RS19725 (I6G49_19725) - 3950759..3951205 (+) 447 WP_023311032.1 YccF domain-containing protein -
  I6G49_RS19730 (I6G49_19730) yccS 3951225..3953387 (+) 2163 WP_059346436.1 YccS family putative transporter -
  I6G49_RS19735 (I6G49_19735) sxy/tfoX 3953344..3953970 (-) 627 WP_023311030.1 TfoX/Sxy family DNA transformation protein Regulator
  I6G49_RS19740 (I6G49_19740) sulA 3954188..3954697 (+) 510 WP_038417560.1 SOS-induced cell division inhibitor SulA -
  I6G49_RS19745 (I6G49_19745) ompA 3955052..3956107 (+) 1056 WP_115504044.1 porin OmpA -
  I6G49_RS19750 (I6G49_19750) matP 3956171..3956623 (-) 453 WP_038417562.1 macrodomain Ter protein MatP -
  I6G49_RS19755 (I6G49_19755) - 3956810..3958570 (+) 1761 WP_059346435.1 AAA family ATPase -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23906.46 Da        Isoelectric Point: 9.4588

>NTDB_id=513057 I6G49_RS19735 WP_023311030.1 3953344..3953970(-) (sxy/tfoX) [Enterobacter asburiae strain FDAARGOS_892]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALSAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARASWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=513057 I6G49_RS19735 WP_023311030.1 3953344..3953970(-) (sxy/tfoX) [Enterobacter asburiae strain FDAARGOS_892]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCTCAGGAATACCTCTCCCCGTTGGGCGAGATTCATCACCGCGCGCT
GTTTGGAGGCTATACCCTGGCGGTGGATGATGCGGTTTTTGCCATGGTGTCAGACGGCGAGCTTTATCTCCGCGCCTGTG
AGGAGAGTGCGAAATACTGTGTAAAAAATGCCTCCTCTTTTTTGACGTTGATGAAGCGAGGCCGCCCGGTGCTGCTCAAC
TATTATCGTGTGGATGACGGATTATGGCAGGACAGGGAGCGGTTGCTTCAGCTCTCCTCGTTTGCGCTCAGTGCGGCAAG
AAAAGAACGCTATCAGCGCCATCAACGAAACCGACTTAAGGATCTGCCAAACCTGACCTTTCAGCTTGAGGTTTTGCTCT
TTGAAGCTGGCATTACCAATGAGGAAACGCTGCGGGCGCTGGGTGCAAGAGCGAGCTGGCTAAAGATGCGGGCAAAAAAC
AAAGCGCTCAGTATTAAAGTTCTCTTCGCACTGGAAGGGGCTATCGAGGGGCTGCATGAGGCGGCACTCCCGGCGGGCAT
TCGCCGGGAGCTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Z3N2L7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.128

97.596

0.567