Detailed information NTG0512953

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: I6G56_RS03965
• Genome accession: NZ_CP065686
• Coordinates: 548457..549713 (-)
• Length: 418 a.a.
• NCBI ID: WP_006024477.1
• Uniprot ID: A0AAU8SZ00
• Organism: Burkholderia humptydooensis strain FDAARGOS_899
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 543457..554713

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G56_RS03950 (I6G56_03940)	-	544377..544772 (-)	396	WP_010676307.1	nitrite reductase (NAD(P)H) small subunit	-
I6G56_RS03955 (I6G56_03945)	nirB	544828..547272 (-)	2445	WP_043281987.1	nitrite reductase large subunit NirB	-
I6G56_RS03960 (I6G56_03950)	maiA	547658..548302 (+)	645	WP_010676309.1	maleylacetoacetate isomerase	-
I6G56_RS03965 (I6G56_03955)	pilA	548457..549713 (-)	1257	WP_006024477.1	signal recognition particle-docking protein FtsY	Machinery gene
I6G56_RS03970 (I6G56_03960)	rsmD	549969..550595 (+)	627	WP_006024478.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
I6G56_RS03975 (I6G56_03965)	coaD	550708..551208 (+)	501	WP_010676314.1	pantetheine-phosphate adenylyltransferase	-
I6G56_RS03980 (I6G56_03970)	-	551273..551536 (+)	264	WP_010676315.1	YfhL family 4Fe-4S dicluster ferredoxin	-
I6G56_RS03985 (I6G56_03975)	hisC	551670..552737 (-)	1068	WP_010676316.1	histidinol-phosphate transaminase	-
I6G56_RS03990 (I6G56_03980)	pth	552788..553393 (-)	606	WP_006024482.1	aminoacyl-tRNA hydrolase	-
I6G56_RS03995 (I6G56_03985)	-	553519..554133 (-)	615	WP_015600789.1	50S ribosomal protein L25/general stress protein Ctc	-

Sequence

Protein

• Length: 418 a.a.
• Molecular weight: 43750.09 Da
• Isoelectric Point: 6.3719

>NTDB_id=512953 I6G56_RS03965 WP_006024477.1 548457..549713(-) (pilA) [Burkholderia humptydooensis strain FDAARGOS_899]
MFSFFKRFKKAPDAAPAEPQPAPDAPQDDARAPAAPEATRVDAPTAPVARAETPPASPAAAAPESPVGQPQPSTAAAAAA
RASAKPAPSVVMTVTPSSNGRNGVVETVEIVPPPAPEPAAKKSWIARLKSGLAKTSSSITNVFVNTKIDDALYEELETAL
LMSDAGIDATEHLLGALREKVRTGRLTDPQQVKDALRGLLVDLLTPLEKSLVLGRAQPLVMMIAGVNGAGKTTSIGKLAK
HLQSFNQSVLLAAGDTFRAAAREQLAIWGERNNVTVVQQESGDPAAVIFDAVSAARARNIDVMMADTAGRLPTQLHLMEE
LRKVKRVIGKAHDGAPHEVLLVIDANTGQNALAQVKAFDDTLGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFIGVGEK
VEDLQPFSAEEFADALLG

Nucleotide

• Length: 1257 bp

>NTDB_id=512953 I6G56_RS03965 WP_006024477.1 548457..549713(-) (pilA) [Burkholderia humptydooensis strain FDAARGOS_899]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAGCGCCCGATGCCGCACCGGCCGAGCCGCAGCCAGCGCCCGACGCGCCGCA
GGACGACGCCCGCGCGCCGGCCGCGCCCGAGGCCACGCGAGTCGACGCGCCCACCGCGCCGGTCGCGCGCGCCGAAACGC
CGCCCGCCTCCCCCGCCGCCGCGGCGCCGGAATCGCCGGTTGGGCAGCCGCAGCCCTCCACAGCAGCAGCAGCAGCGGCT
CGCGCGAGCGCCAAGCCCGCGCCGTCCGTCGTGATGACGGTCACGCCGTCGTCGAACGGCCGCAACGGCGTCGTCGAGAC
GGTCGAGATCGTGCCGCCGCCCGCGCCCGAGCCGGCCGCGAAGAAATCGTGGATTGCACGGCTGAAGTCCGGCCTCGCGA
AGACGAGCTCGAGCATCACGAACGTGTTCGTCAACACGAAGATCGACGACGCACTCTACGAGGAACTCGAGACGGCGCTA
CTGATGTCCGACGCCGGCATCGACGCGACCGAGCATCTGCTCGGCGCGCTGCGCGAGAAGGTGCGCACGGGCCGCCTCAC
CGATCCGCAACAGGTGAAGGACGCGCTGCGCGGCCTGCTCGTCGATCTGCTGACGCCGCTCGAGAAGTCGCTCGTGCTCG
GCCGCGCGCAGCCGCTCGTGATGATGATCGCGGGCGTGAATGGCGCGGGCAAGACGACGAGCATCGGCAAGCTCGCGAAG
CATCTGCAGAGCTTCAATCAGTCGGTGCTGCTCGCCGCGGGCGACACGTTCCGCGCGGCCGCGCGCGAGCAGCTCGCGAT
CTGGGGCGAGCGCAACAACGTGACCGTCGTCCAGCAGGAAAGCGGCGATCCGGCCGCGGTGATCTTCGATGCGGTCAGCG
CCGCGCGCGCGCGCAACATCGACGTGATGATGGCCGACACCGCGGGCCGCCTGCCGACGCAGTTGCATCTGATGGAAGAG
CTCCGGAAGGTGAAGCGCGTGATCGGCAAGGCGCACGACGGCGCGCCGCACGAGGTGCTGCTCGTCATCGACGCGAACAC
CGGCCAGAACGCGCTCGCGCAGGTGAAGGCGTTCGACGACACGCTCGGCCTCACGGGCCTCATCGTCACGAAGCTCGACG
GCACCGCGAAGGGAGGCATCCTCGCCGCGATCGCGCGTCAGCGGCCGATTCCCGTGTACTTCATCGGCGTCGGCGAGAAG
GTCGAGGATCTGCAACCGTTCAGCGCGGAGGAATTCGCGGACGCGTTGCTCGGATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (219-418)

• SRP54-type protein, helical bundle domain (SRP54_N) (137-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.459	100	0.536