Detailed information NTG0051294

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: MYA_RS12535
• Genome accession: NC_017920
• Coordinates: 2776446..2777579 (+)
• Length: 377 a.a.
• NCBI ID: WP_011886072.1
• Uniprot ID: I2DQK4
• Organism: Burkholderia sp. KJ006
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2771446..2782579

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MYA_RS12505 (MYA_2564)	-	2772101..2772706 (+)	606	WP_011886067.1	50S ribosomal protein L25/general stress protein Ctc	-
MYA_RS12510 (MYA_2565)	pth	2772824..2773423 (+)	600	WP_014723674.1	aminoacyl-tRNA hydrolase	-
MYA_RS12515 (MYA_2566)	hisC	2773557..2774624 (+)	1068	WP_011886069.1	histidinol-phosphate transaminase	-
MYA_RS12520 (MYA_2567)	-	2774695..2774961 (-)	267	WP_011886070.1	YfhL family 4Fe-4S dicluster ferredoxin	-
MYA_RS12525 (MYA_2568)	coaD	2775021..2775518 (-)	498	WP_006398238.1	pantetheine-phosphate adenylyltransferase	-
MYA_RS12530 (MYA_2569)	rsmD	2775630..2776244 (-)	615	WP_011886071.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
MYA_RS12535 (MYA_2570)	pilA	2776446..2777579 (+)	1134	WP_011886072.1	signal recognition particle-docking protein FtsY	Machinery gene
MYA_RS12540 (MYA_2571)	maiA	2777664..2778308 (-)	645	WP_011886073.1	maleylacetoacetate isomerase	-
MYA_RS12545 (MYA_2572)	ybiB	2778503..2779480 (+)	978	WP_011886074.1	DNA-binding protein YbiB	-
MYA_RS12550 (MYA_2573)	leuA	2779929..2781575 (+)	1647	WP_011886075.1	2-isopropylmalate synthase	-
MYA_RS12555 (MYA_2574)	-	2781716..2782099 (-)	384	WP_014723676.1	nuclear transport factor 2 family protein	-

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 40148.96 Da
• Isoelectric Point: 5.0388

>NTDB_id=51294 MYA_RS12535 WP_011886072.1 2776446..2777579(+) (pilA) [Burkholderia sp. KJ006]
MFSFFKRFKKTQEPDSAESQPADAPQPDEPSAAPAPAARAADTARAPAVVMTVTPTNDGSDEVVEAVEIVPPPTQDASAK
KSWLSRLKSGLAKTGSSITSVFVNTKIDEDLYEELETALLMSDAGVDATEYLLGALREKVRVGRLTDPQQVKAALHDLLV
ELLQPLEKSLMLGRAQPLVMMITGVNGAGKTTSIGKLAKHLQSFDQSVLLAAGDTFRAAAREQLAVWGERNNVTVVQQES
GDPAAVIFDAVSAARARKIDVMMADTAGRLPTQLHLMEELKKVKRVIAKAHDGAPHEVLLVIDANTGQNALTQVKAFDDA
LGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEKVEDLQPFNAVEFADALLG

Nucleotide

• Length: 1134 bp

>NTDB_id=51294 MYA_RS12535 WP_011886072.1 2776446..2777579(+) (pilA) [Burkholderia sp. KJ006]
ATGTTCAGCTTCTTCAAACGATTCAAGAAAACGCAGGAGCCCGACTCCGCGGAATCGCAACCGGCCGACGCGCCGCAGCC
GGACGAGCCGTCCGCTGCGCCGGCCCCCGCCGCGCGAGCGGCGGACACTGCGCGCGCGCCCGCCGTCGTGATGACGGTCA
CGCCCACCAACGACGGCAGCGACGAAGTCGTCGAAGCGGTCGAGATCGTGCCGCCGCCGACGCAGGACGCGTCCGCGAAG
AAGTCCTGGCTGTCGCGCCTGAAATCGGGGCTCGCGAAGACGGGTTCGAGCATCACCAGCGTGTTCGTCAACACGAAGAT
CGACGAGGACCTGTACGAGGAGCTCGAAACCGCGCTGCTGATGTCCGATGCGGGCGTCGATGCGACCGAATACCTGCTCG
GCGCGCTGCGCGAGAAGGTGCGCGTGGGCCGGCTGACCGACCCGCAGCAGGTGAAGGCGGCGCTGCACGATCTGCTCGTC
GAGCTGCTGCAGCCGCTCGAGAAATCGTTGATGCTCGGCCGCGCGCAGCCGCTCGTGATGATGATCACCGGCGTGAACGG
CGCGGGCAAGACGACCAGCATCGGCAAGCTCGCGAAGCACCTGCAGAGCTTCGACCAGTCGGTGCTGCTGGCCGCGGGCG
ACACGTTCCGCGCGGCCGCGCGCGAGCAGCTGGCCGTCTGGGGCGAGCGCAACAACGTGACGGTCGTCCAGCAGGAAAGC
GGCGATCCGGCCGCGGTGATCTTCGATGCGGTCAGCGCCGCGCGCGCGCGCAAGATCGACGTGATGATGGCCGACACGGC
CGGCCGGCTGCCGACCCAGCTGCACCTGATGGAGGAGCTGAAAAAGGTGAAGCGCGTGATCGCGAAGGCGCACGACGGCG
CGCCGCACGAGGTGCTGCTCGTGATCGACGCGAACACCGGCCAGAACGCGCTCACGCAGGTGAAGGCCTTCGACGATGCG
CTCGGCCTCACCGGGCTGATCGTCACGAAGCTCGACGGCACCGCGAAGGGCGGGATCCTCGCCGCGATCGCGCGGCAGCG
TCCGGTGCCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGGACCTGCAGCCGTTCAACGCGGTGGAATTCGCGGACG
CGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (178-377)

• SRP54-type protein, helical bundle domain (SRP54_N) (95-157)

3D structure

• AlphaFold DB: I2DQK4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.885	100	0.584