Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I6G66_RS14875 Genome accession   NZ_CP065668
Coordinates   3119172..3119570 (-) Length   132 a.a.
NCBI ID   WP_016447937.1    Uniprot ID   A0AAX3SQK3
Organism   Delftia acidovorans strain FDAARGOS_909     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3114172..3124570
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G66_RS14860 (I6G66_14855) - 3115996..3118245 (-) 2250 WP_183019088.1 methyl-accepting chemotaxis protein -
  I6G66_RS14865 (I6G66_14860) - 3118264..3118791 (-) 528 WP_012203503.1 chemotaxis protein CheW -
  I6G66_RS14870 (I6G66_14865) - 3118807..3119172 (-) 366 WP_013804030.1 response regulator -
  I6G66_RS14875 (I6G66_14870) pilG 3119172..3119570 (-) 399 WP_016447937.1 response regulator Regulator
  I6G66_RS14880 (I6G66_14875) - 3119618..3119770 (-) 153 WP_013804031.1 rubredoxin -
  I6G66_RS14885 (I6G66_14880) thiD 3119886..3120842 (+) 957 WP_197957313.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  I6G66_RS14890 (I6G66_14885) hemL 3120979..3122277 (+) 1299 WP_013804032.1 glutamate-1-semialdehyde 2,1-aminomutase -
  I6G66_RS14895 (I6G66_14890) - 3122328..3122927 (-) 600 WP_197957314.1 DNA-3-methyladenine glycosylase I -
  I6G66_RS14900 (I6G66_14895) - 3122930..3123424 (-) 495 WP_197957315.1 c-type cytochrome -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14600.85 Da        Isoelectric Point: 6.9242

>NTDB_id=512814 I6G66_RS14875 WP_016447937.1 3119172..3119570(-) (pilG) [Delftia acidovorans strain FDAARGOS_909]
MTTSGAPLRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFA
DTPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVEQFGKQTIGAL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=512814 I6G66_RS14875 WP_016447937.1 3119172..3119570(-) (pilG) [Delftia acidovorans strain FDAARGOS_909]
GTGACGACATCGGGCGCACCCTTGCGCGTACTCGTGGTGGATGACAGCAATACCATCCGCCGCAGCGCAGAAATCTTCCT
CAAGCAAGGCGGGCACGAAGTGCTCCTGGCCGACGACGGCTTCGACGCGCTGTCCAAGGTCAACGACTACCAGCCCCAGC
TGATCTTCTGCGACATCCTCATGCCCAAGCTGGACGGCTACCAGACCTGCGCCATCATCAAGCGCAATGCGCGCTTCGCT
GATACGCCCGTGGTCATGCTCTCGTCCAAGGACGGCGTATTCGACAAGGCGCGCGGGCGCATGGTGGGCTGCCAGGACTA
CCTCACGAAACCCTTCACCAAAGACCAGCTGCTGCAGGCCGTGGAGCAGTTCGGCAAGCAAACCATAGGAGCACTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.772

86.364

0.508