Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   I6G67_RS15805 Genome accession   NZ_CP065666
Coordinates   3179739..3181307 (+) Length   522 a.a.
NCBI ID   WP_004692838.1    Uniprot ID   A0A380U9K1
Organism   Acinetobacter johnsonii strain FDAARGOS_910     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3174739..3186307
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G67_RS15785 (I6G67_15785) - 3175214..3176518 (+) 1305 WP_010325700.1 homoserine dehydrogenase -
  I6G67_RS15790 (I6G67_15790) thrC 3176584..3177723 (+) 1140 WP_004692833.1 threonine synthase -
  I6G67_RS15795 (I6G67_15795) - 3177811..3178866 (-) 1056 WP_005400997.1 serine hydrolase -
  I6G67_RS15800 (I6G67_15800) - 3179082..3179717 (+) 636 WP_004692836.1 response regulator -
  I6G67_RS15805 (I6G67_15805) pilS 3179739..3181307 (+) 1569 WP_004692838.1 PAS domain-containing sensor histidine kinase Regulator
  I6G67_RS15810 (I6G67_15810) pilR 3181380..3182744 (+) 1365 WP_406935417.1 sigma-54-dependent transcriptional regulator Regulator
  I6G67_RS15815 (I6G67_15815) - 3182749..3183924 (-) 1176 WP_004692840.1 S41 family peptidase -
  I6G67_RS15820 (I6G67_15820) gpmI 3183943..3185490 (-) 1548 WP_004692841.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 522 a.a.        Molecular weight: 59711.19 Da        Isoelectric Point: 6.5649

>NTDB_id=512803 I6G67_RS15805 WP_004692838.1 3179739..3181307(+) (pilS) [Acinetobacter johnsonii strain FDAARGOS_910]
MLQYSTNIQLNQYRLGVWYASYRLFIGCCLLLVYLLTYEQLFSNYQYPVLYRSVLIGFIFISAFQLLSLKHVRKRIPLQL
TLLFIVDVISLSLLTFATDGPNLQLSLLFVITIFASCVLVDKQKALIITLIAVITLVYQHFIGTLFSISSLNTIGNSAVL
AFLFFVVYGSGQIAVRRFQVLENLNFYQSQELDQLQNINRYILEQTELGYLVLDENCHMVLSNPAACALLGISPIYAHDK
YPLYKAQPDLFELLKFDQLKNGEKFQFTSQLSRFQIQIEIQKLQVPNQTLTLFVLQDAQKINQRVQQLKLAALGQLSASI
AHEIRNPLAAITQANELMQLNDPQQELLHNMIAKQASRIDKIIGDTLNMARSKETYPTLIDVASFLERFIVEDLPDVKDQ
IDYRISDQAQIQFDEQQLRQVLINLIRNAIRHNAAEAEHIHIRVYSYKNLVHIDVCDFGEGVATQDQSTLFQPFFSTSIN
GTGLGLYLSHSFCEANQAKLYYVEQKIGACFRIECPRINNDV

Nucleotide


Download         Length: 1569 bp        

>NTDB_id=512803 I6G67_RS15805 WP_004692838.1 3179739..3181307(+) (pilS) [Acinetobacter johnsonii strain FDAARGOS_910]
ATGCTGCAATACTCAACCAATATTCAGTTAAATCAATACCGTCTAGGTGTTTGGTATGCGTCTTATCGACTGTTTATTGG
TTGCTGTTTATTGTTGGTTTATCTGCTGACTTATGAGCAACTGTTTTCCAATTATCAATATCCAGTATTGTATCGTTCTG
TCCTGATTGGCTTTATTTTTATCAGTGCCTTTCAGCTATTGAGCCTCAAGCATGTGCGCAAGCGCATACCACTTCAGCTC
ACCTTGTTATTTATCGTCGATGTCATTAGCCTCAGCTTACTTACTTTCGCCACCGATGGTCCGAACTTACAGTTAAGTTT
ATTGTTTGTGATCACGATCTTTGCCTCTTGTGTATTGGTCGATAAACAAAAAGCACTCATCATTACGTTGATTGCTGTGA
TTACACTGGTTTATCAACACTTTATTGGAACGCTATTTTCAATTAGTTCACTGAATACCATTGGCAACAGTGCCGTGCTC
GCCTTTTTGTTCTTTGTGGTTTATGGGTCTGGACAAATTGCAGTACGACGTTTTCAAGTCCTTGAAAATTTAAACTTCTA
TCAGTCCCAAGAACTGGATCAACTGCAAAACATTAACCGTTATATTTTAGAGCAAACCGAGCTCGGCTATTTGGTTCTCG
ATGAAAACTGCCACATGGTGCTGAGTAATCCTGCCGCATGTGCATTATTGGGTATCTCCCCGATTTATGCTCACGATAAA
TATCCTTTGTACAAAGCACAGCCTGATTTATTTGAACTCCTCAAATTCGACCAACTGAAGAATGGAGAAAAATTCCAATT
TACATCCCAGCTGAGTCGCTTTCAAATTCAGATCGAAATTCAAAAACTACAAGTACCGAATCAGACACTCACCTTATTCG
TCCTGCAAGATGCACAAAAAATTAATCAACGTGTACAACAACTCAAACTGGCTGCACTGGGTCAACTTTCTGCCAGCATT
GCACATGAAATCCGCAATCCACTGGCAGCCATCACGCAAGCCAATGAATTAATGCAACTTAACGACCCACAACAAGAACT
GTTGCATAACATGATTGCCAAACAAGCCTCACGGATTGATAAAATTATTGGCGATACACTGAACATGGCACGCAGTAAAG
AAACCTATCCGACCTTGATTGATGTCGCCTCTTTTTTAGAACGTTTTATCGTTGAAGATTTGCCCGATGTCAAAGATCAA
ATTGATTACCGCATTTCCGATCAAGCTCAGATTCAGTTTGATGAACAACAACTGAGGCAAGTGCTGATCAACCTGATTCG
AAATGCCATTCGGCATAATGCAGCTGAAGCCGAGCACATTCACATTCGAGTCTATAGCTATAAAAACCTCGTCCACATTG
ATGTCTGCGATTTTGGTGAAGGGGTCGCCACTCAGGATCAAAGCACCCTGTTTCAACCGTTTTTTAGTACCTCAATCAAT
GGAACTGGGTTAGGATTATATTTATCCCATAGTTTCTGCGAAGCCAACCAAGCTAAGCTATACTATGTAGAACAAAAAAT
AGGGGCATGCTTTCGGATTGAATGCCCCCGTATAAACAATGACGTGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(414-516)

His Kinase A (phospho-acceptor) domain (HisKA)

(312-373)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A380U9K1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

60.269

99.808

0.602