Detailed information    

insolico Bioinformatically predicted

Overview

Name   priA   Type   Machinery gene
Locus tag   I6G67_RS15100 Genome accession   NZ_CP065666
Coordinates   3028436..3030658 (+) Length   740 a.a.
NCBI ID   WP_004692654.1    Uniprot ID   -
Organism   Acinetobacter johnsonii strain FDAARGOS_910     
Function   DNA puliing through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3023436..3035658
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G67_RS15075 (I6G67_15075) lnt 3023861..3025420 (+) 1560 WP_004692644.1 apolipoprotein N-acyltransferase -
  I6G67_RS15080 (I6G67_15080) - 3025487..3025825 (-) 339 WP_004692646.1 tRNA-binding protein -
  I6G67_RS15085 (I6G67_15085) - 3025988..3026323 (-) 336 WP_004692648.1 hypothetical protein -
  I6G67_RS15090 (I6G67_15090) gspG 3026607..3027044 (-) 438 WP_004692650.1 type II secretion system major pseudopilin GspG -
  I6G67_RS15095 (I6G67_15095) gspF 3027078..3028283 (-) 1206 WP_004692652.1 type II secretion system inner membrane protein GspF -
  I6G67_RS15100 (I6G67_15100) priA 3028436..3030658 (+) 2223 WP_004692654.1 primosomal protein N' Machinery gene
  I6G67_RS15105 (I6G67_15105) - 3030741..3032582 (+) 1842 WP_004692655.1 monovalent cation:proton antiporter-2 (CPA2) family protein -
  I6G67_RS15110 (I6G67_15110) - 3032633..3033508 (+) 876 WP_004692657.1 Hsp33 family molecular chaperone HslO -
  I6G67_RS15115 (I6G67_15115) - 3033708..3034160 (+) 453 WP_004692659.1 DUF2147 domain-containing protein -
  I6G67_RS15120 (I6G67_15120) - 3034304..3035257 (+) 954 WP_004692661.1 DnaJ C-terminal domain-containing protein -
  I6G67_RS15125 (I6G67_15125) - 3035268..3035624 (+) 357 WP_004692663.1 chaperone modulator CbpM -

Sequence

Protein


Download         Length: 740 a.a.        Molecular weight: 84175.08 Da        Isoelectric Point: 8.8797

>NTDB_id=512797 I6G67_RS15100 WP_004692654.1 3028436..3030658(+) (priA) [Acinetobacter johnsonii strain FDAARGOS_910]
MPENTLSTTPSYRIRVAVPVYLYDCFDYSLTAEQYHQAEVGARVAVSFGRQNVVGVIVEKLTDEKPLDLGFKLKAITELL
DDNAILDAKVLSLLTWSAQYYQFPIGEVMHAALPSFLRQGKPYNLLARMWKLIDDHAEDKLKRSEKQQDAYKILKLHPTG
TSENILNLAGIETATLKALEKKQITQCILEAQDFKPQVMTLAQMPLTPNDEQKRAIQNILKARHSYHAFLLDGLTGSGKT
EVYLQVMQEILKQGKQVLVLVPEIGLTPQTVSRFQSRFHCHIALLHSGLNDSKRLQAWQSAQTGKASIVIGTRSAIYTPL
PHLGLIVLDEEHDLSFKQQEGFRYHARDVALYRAHLENCPIILGSATPSIDSYALVEQGKMTRLELDQRAGVAVMPKMHV
IDLKVAQKQNGISQQLIHEVQKRLDKKEQVLIFLNRRGYAPVLICESCGWQAKCPHCDANFTVHRQPYQHLHCHHCGTIH
RMPEHCPQCQHSELKPIGLGTAKVEENLQALFPNFDVIRVDRDSTSRVGSWQKIYNKIQKSEPIILLGTQMLAKGHHFPY
VTLVAILDIDSGLLSVDFRATERTAQLIIQVAGRAGRGEKKGEVYLQTLRPDHPLLNTLLESGYRSFAKQTLKERKAAWM
PPYRYAALLRCESKDQELNQSFLQEHAQALRQASENSIDIWGPIPAPMERKAGRYQAHMVLLSKDRARMHFYIRQWWQNV
WHNKPHGMKLSLDIDPQELS

Nucleotide


Download         Length: 2223 bp        

>NTDB_id=512797 I6G67_RS15100 WP_004692654.1 3028436..3030658(+) (priA) [Acinetobacter johnsonii strain FDAARGOS_910]
ATGCCAGAAAATACACTTTCCACAACACCAAGCTACCGTATTCGTGTGGCTGTTCCCGTTTACCTATATGACTGTTTTGA
CTATAGTTTAACGGCTGAACAATACCACCAAGCTGAAGTGGGTGCACGTGTGGCTGTCTCATTTGGTCGCCAAAATGTGG
TCGGTGTCATTGTTGAGAAACTCACTGATGAGAAACCACTCGATTTAGGTTTTAAACTTAAAGCCATAACTGAGTTGCTC
GATGACAACGCTATTCTAGATGCTAAAGTTTTAAGTTTATTGACATGGTCAGCGCAATATTACCAATTTCCGATTGGGGA
AGTGATGCATGCTGCTTTACCCAGCTTTTTACGCCAAGGTAAACCCTATAATTTACTGGCGCGGATGTGGAAGCTGATTG
ATGATCATGCCGAAGACAAATTGAAGCGTTCTGAAAAACAACAAGATGCCTATAAAATTTTAAAGCTGCATCCCACAGGA
ACGTCTGAAAACATTCTAAATTTGGCTGGCATTGAAACGGCGACCTTAAAAGCCTTAGAAAAAAAGCAAATCACCCAGTG
CATACTTGAAGCTCAAGACTTTAAACCGCAAGTTATGACACTGGCGCAAATGCCCCTCACGCCCAATGATGAACAAAAGC
GTGCCATTCAAAACATTCTCAAAGCTCGTCATAGCTACCATGCTTTCTTACTGGATGGTTTAACCGGTAGTGGGAAAACT
GAAGTCTATTTACAAGTCATGCAAGAGATTTTAAAACAAGGCAAACAGGTCTTGGTATTAGTGCCTGAAATTGGTCTCAC
CCCACAAACAGTGAGCCGTTTTCAGTCACGTTTTCACTGTCATATTGCGCTACTACATTCAGGTTTAAATGATTCTAAGC
GCCTTCAAGCCTGGCAAAGTGCGCAAACGGGCAAAGCCTCAATTGTGATTGGCACACGTTCTGCCATCTATACGCCCCTT
CCGCATTTGGGTTTGATTGTCTTAGATGAAGAGCATGATCTATCTTTCAAGCAACAAGAAGGCTTTCGCTACCATGCTCG
TGATGTGGCTTTATACCGTGCACACTTAGAAAACTGTCCGATTATCCTCGGTTCTGCAACGCCAAGTATCGACAGTTATG
CATTGGTTGAACAAGGTAAAATGACCCGTTTGGAGTTGGACCAACGTGCAGGTGTGGCCGTGATGCCGAAAATGCATGTG
ATCGATCTGAAAGTGGCACAGAAACAAAATGGCATCAGCCAACAGCTGATTCATGAAGTACAAAAGCGCTTAGACAAAAA
AGAACAGGTGCTGATTTTCTTAAACCGTCGCGGCTATGCGCCTGTGTTGATTTGTGAAAGTTGTGGCTGGCAGGCGAAGT
GCCCACATTGCGATGCCAATTTTACCGTGCATCGACAGCCCTACCAGCATTTGCACTGTCACCACTGCGGCACCATCCAC
CGCATGCCTGAACACTGCCCGCAATGTCAGCATAGCGAACTGAAACCAATTGGTTTAGGCACCGCAAAAGTTGAAGAAAA
CCTACAAGCACTGTTCCCCAACTTTGATGTAATTCGGGTGGATCGTGACTCGACCAGTCGGGTCGGTAGTTGGCAAAAAA
TCTATAACAAGATTCAGAAAAGTGAACCCATCATTTTGCTCGGTACTCAAATGCTGGCCAAAGGACATCACTTTCCTTAT
GTGACTTTGGTGGCGATTTTAGACATTGACTCAGGCTTACTCAGTGTTGACTTTCGTGCCACAGAACGTACTGCACAGCT
CATCATCCAAGTTGCGGGACGTGCTGGGCGCGGTGAGAAAAAAGGCGAAGTGTATTTACAAACTTTACGTCCAGACCACC
CTTTGCTGAATACCCTGCTAGAATCGGGCTATCGCAGCTTTGCCAAGCAAACGTTGAAAGAACGTAAAGCTGCATGGATG
CCACCTTATCGCTATGCGGCTTTATTGCGCTGTGAATCCAAAGACCAAGAACTGAACCAAAGCTTTTTACAAGAGCATGC
ACAAGCATTGCGCCAAGCCTCAGAAAACAGTATTGATATTTGGGGGCCAATTCCTGCGCCGATGGAACGTAAAGCAGGCC
GCTATCAAGCGCATATGGTACTACTGTCCAAAGACCGTGCGCGGATGCATTTTTACATTCGTCAGTGGTGGCAAAATGTC
TGGCATAACAAACCGCATGGTATGAAATTGAGCCTTGATATTGATCCACAAGAGTTAAGTTAA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(210-371)

3DNA-binding domain (3BD) (PriA_3primeBD)

(15-114)

Primosomal protein N C-terminal domain (PriA_C)

(642-736)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  priA Acinetobacter baumannii D1279779

71.819

98.784

0.709