Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   I6G67_RS12390 Genome accession   NZ_CP065666
Coordinates   2448048..2452526 (-) Length   1492 a.a.
NCBI ID   WP_004694487.1    Uniprot ID   A0A380TQZ8
Organism   Acinetobacter johnsonii strain FDAARGOS_910     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 2443048..2457526
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G67_RS12360 (I6G67_12360) elsL 2444095..2444598 (-) 504 WP_004694473.1 cell wall-recycling L,D-carboxypeptidase ElsL -
  I6G67_RS12365 (I6G67_12365) - 2444598..2444990 (-) 393 WP_004694474.1 YbaN family protein -
  I6G67_RS12370 (I6G67_12370) - 2445088..2445966 (+) 879 WP_004694477.1 DUF1853 family protein -
  I6G67_RS12375 (I6G67_12375) - 2446154..2446270 (+) 117 WP_373868118.1 entericidin A/B family lipoprotein -
  I6G67_RS12380 (I6G67_12380) dapE 2446389..2447522 (+) 1134 WP_026056444.1 succinyl-diaminopimelate desuccinylase -
  I6G67_RS12385 (I6G67_12385) - 2447588..2448043 (-) 456 WP_004694485.1 hypothetical protein -
  I6G67_RS12390 (I6G67_12390) chpA 2448048..2452526 (-) 4479 WP_004694487.1 Hpt domain-containing protein Regulator
  I6G67_RS12395 (I6G67_12395) - 2452693..2454765 (-) 2073 WP_004694489.1 methyl-accepting chemotaxis protein -
  I6G67_RS12400 (I6G67_12400) - 2454816..2455352 (-) 537 WP_004694490.1 chemotaxis protein CheW -
  I6G67_RS12405 (I6G67_12405) - 2455358..2455726 (-) 369 WP_004694491.1 response regulator -
  I6G67_RS12410 (I6G67_12410) pilG 2455754..2456137 (-) 384 WP_004694493.1 twitching motility response regulator PilG Regulator
  I6G67_RS12415 (I6G67_12415) - 2456418..2457056 (+) 639 WP_004694495.1 hypothetical protein -

Sequence


Protein


Download         Length: 1492 a.a.        Molecular weight: 166558.14 Da        Isoelectric Point: 4.3797

>NTDB_id=512789 I6G67_RS12390 WP_004694487.1 2448048..2452526(-) (chpA) [Acinetobacter johnsonii strain FDAARGOS_910]
MKEIIKHLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVDLDPLFEKWYAEPTHQETLLSIRRHFHTLKGSGRMVGAKSA
GETAWAVEDTLNRVISGAVPLTATVQKFAKTVFKLYQFKLYPIFKAVQEIDLDLRPLVLIGQQLQQNQSLEPALEELLQL
SNHLNSNDVMTGLELSDIEVAESEPQVADVSEQDGQVHDVLEETLAIFIEEAEDHLATIDQFLNADETKVQDYNGLIRAL
HTLRGSSSMAQIEHVFNASSKVENLFKTLVQEEIVSTSKEISLLTQYAEFVRDYLHVLGRGTNEQLDVIYATFTTAWDNY
GFSIEDVDDELNPQGMVSKLIELNIDLLLDAEFEFDQRAKVEYPEYIQHLGEQAKQLLEFTNNRAAQGIHDFTSELYAGY
QALLEKPELLNVDYAYELFGQAHQEFIHLFDTLAAGQRVILTEEVHKVLNELMAFVQQDVESTSTTVIEPVAEAIVSGNT
LQPSLDLAQISQQIASDHQYKQSNTANTDFDDDLLDIFLEEAEELLMGMDQDLNTWSKNGNDTAALNNLMRYLHTLKGGA
NMISAPFIGSIAHELESIYERVIRQQIATTPQLISIIRLVQDDVADRIQVIRTEKVDYPATATIKVLHNIQSLVEGTTVT
TTVSEPLVEAFVAAVEEPLSNIDRTIEAEAAAVESATAIEEPSVVDNTDVTVVEQLDTPSLVQEEAVSAVEEAASLLSIV
EETFLEEAEEILATTDGLLKQWTEQRSDRSVLLQLQRAAHSLKGGARMAENEPVGAIAYELETTFEQFAVHNFSSNVYDP
LLQTAFEWLKQAIFKRDFSNYDGLKNSLASIDYVDVIAQLPTRVTQIDLLNAVPSFEFVQGDGTEPPAMLGEWKETTHLD
GGNEMIRISADLVEKMIDLSGENAINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSENSRYADF
DPLEMDQYSSLNQLSKSLAESASDLVDFKSTLAEKIRDAEGLLLQQSRIQAEIQESLMRTRLVPFSRMLPRLQRIVRQTA
STLNRPTELVVHNTEGELDRTILERLVTPFEHMLRNAIDHGIEDTEQRGAAKKSATGQIELNISRQGTDVIVSFKDDGKG
IDESTIKAKALNLGLIKADQVLDKQEILQFIFHPGFSTAKEVTQISGRGVGLDVVQSEIKALGGHVTVESEIGLGTTFII
RVPTTVAVSDALMVKAGDQQYAIPLAQIDRIVRIAPTALDQYFHSKDDQFKIDGVSYKLRYLSEFLSNQPIPRLSNIGHS
LPVLLIKGNSGQTIALLVDQLIGSRAQIVVKPVGQQFASIGAIAGATILGDGHVCLILDGQNIARQILSTKRVTHAADHR
DFGRHQDTRRLVMIVDDSVTVRKVTSRLLERQGFDIVTAKDGVDAMEQLESVKPDLMLLDIEMPRMDGFEVTNLVRHHEI
HQNLPIIMITSRTGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLLAEKQG

Nucleotide


Download         Length: 4479 bp        

>NTDB_id=512789 I6G67_RS12390 WP_004694487.1 2448048..2452526(-) (chpA) [Acinetobacter johnsonii strain FDAARGOS_910]
ATGAAAGAAATAATAAAACATTTAGTTGAAACGACAACGCTTCCGGAAGATAGTTATCTAGATCAAGATGCAGAAATTCT
TGAAATTTTTGTTGAAGAAATTGAAGAAATCTTCGTTGACTTAGATCCATTATTTGAAAAGTGGTACGCTGAACCGACAC
ATCAAGAAACTTTGTTGAGCATACGTCGTCACTTCCATACCTTAAAAGGCTCTGGTCGTATGGTGGGGGCAAAGTCAGCA
GGTGAAACAGCATGGGCGGTTGAAGATACCTTAAATCGTGTGATTTCAGGGGCTGTGCCTCTCACGGCAACGGTTCAAAA
ATTCGCTAAAACAGTATTCAAACTGTATCAATTTAAACTGTATCCGATATTCAAAGCGGTACAGGAAATTGATCTTGATC
TTCGTCCATTGGTTTTAATTGGACAACAATTACAACAAAATCAAAGTTTAGAACCTGCTCTAGAAGAGTTGCTACAACTG
TCTAATCATCTAAATAGTAATGATGTCATGACGGGATTAGAGCTGAGCGATATTGAAGTGGCTGAATCTGAGCCACAAGT
TGCAGACGTTTCTGAGCAGGATGGTCAAGTGCATGATGTTCTTGAAGAAACTTTAGCGATCTTCATTGAAGAAGCGGAAG
ACCATTTAGCGACTATCGATCAGTTCTTAAATGCAGATGAAACCAAAGTACAAGATTACAATGGCTTAATCCGTGCTTTA
CATACATTGCGCGGTAGTTCGTCTATGGCGCAAATTGAGCATGTCTTTAATGCCAGCTCAAAAGTCGAAAATCTATTTAA
AACCTTGGTACAAGAAGAGATTGTTTCCACCTCGAAGGAGATCTCTTTACTCACCCAATATGCTGAATTTGTACGTGATT
ATTTACATGTGCTTGGGCGTGGTACGAACGAACAGCTTGACGTGATTTACGCCACGTTCACTACGGCTTGGGATAACTAT
GGTTTCAGTATTGAAGACGTAGATGATGAGCTAAACCCACAAGGTATGGTCTCGAAGCTGATCGAGTTAAATATTGATCT
GTTGCTTGATGCCGAGTTTGAGTTTGATCAGCGTGCTAAGGTTGAATATCCTGAATATATTCAGCACTTAGGTGAACAAG
CAAAACAATTGCTAGAATTCACCAATAACCGTGCTGCTCAAGGAATTCATGACTTTACTTCTGAGCTATATGCTGGTTAT
CAAGCCTTACTGGAAAAGCCAGAATTACTCAATGTAGATTATGCATACGAGTTATTTGGTCAGGCACATCAAGAATTTAT
CCATTTATTTGACACTTTAGCTGCGGGTCAGCGTGTCATTCTGACTGAAGAAGTGCATAAAGTTCTGAATGAATTAATGG
CCTTCGTACAGCAAGATGTTGAATCGACTTCGACGACGGTAATTGAACCTGTTGCTGAGGCTATTGTTTCTGGAAATACT
TTACAACCAAGCCTTGATCTTGCGCAGATTTCGCAGCAAATTGCATCGGATCATCAGTACAAGCAATCGAATACGGCCAA
TACCGATTTTGATGATGATTTGCTCGATATCTTCTTGGAAGAAGCCGAAGAATTATTGATGGGGATGGATCAGGATCTCA
ATACTTGGTCTAAAAATGGCAATGATACCGCGGCACTCAATAATTTAATGCGTTATTTGCACACCTTAAAAGGTGGTGCC
AATATGATTTCTGCACCTTTTATTGGTTCGATTGCACACGAATTAGAGTCTATTTATGAACGTGTGATTCGTCAGCAAAT
TGCCACAACGCCACAGTTGATCAGCATCATACGTTTAGTACAGGATGACGTCGCAGACCGAATTCAGGTCATTCGCACCG
AGAAGGTTGATTATCCAGCAACAGCAACCATCAAGGTACTGCATAACATTCAGAGCTTAGTTGAGGGTACGACTGTTACA
ACTACAGTATCCGAGCCTTTAGTTGAAGCGTTTGTTGCGGCAGTTGAAGAACCTTTATCTAATATAGATAGAACGATTGA
AGCTGAGGCAGCTGCGGTTGAGTCAGCAACTGCGATTGAAGAGCCGAGTGTAGTTGATAACACTGACGTTACTGTCGTTG
AACAGCTGGATACTCCGTCACTTGTCCAAGAAGAAGCAGTCAGCGCTGTTGAAGAAGCAGCTAGTCTTTTATCAATTGTT
GAAGAAACCTTCTTGGAAGAAGCTGAAGAAATTTTAGCGACTACGGATGGCTTACTGAAACAGTGGACTGAACAACGTAG
TGACCGTAGTGTGTTACTACAATTGCAACGTGCTGCGCACAGCTTAAAAGGCGGCGCGCGTATGGCGGAGAATGAACCCG
TTGGTGCGATTGCTTATGAACTAGAAACCACATTTGAGCAATTTGCTGTACATAATTTCAGTTCAAACGTGTATGACCCA
TTATTGCAAACTGCATTTGAATGGTTAAAACAAGCCATCTTCAAACGTGATTTCAGTAATTATGATGGTTTGAAAAATAG
CTTAGCATCTATTGATTATGTGGATGTGATTGCGCAATTACCGACGCGTGTAACTCAAATTGATTTACTCAATGCGGTAC
CAAGTTTTGAGTTTGTGCAGGGTGATGGTACTGAGCCGCCAGCAATGCTGGGTGAGTGGAAAGAAACGACTCACTTGGAT
GGCGGTAATGAGATGATCCGTATCTCAGCTGATTTGGTTGAAAAAATGATCGACCTATCAGGTGAAAATGCAATTAACCG
TTCGCGTATCGAGATGGACTTAGGTCAACTCGGCAATACGTTGAACGAGATGGAGCTTGCAATTAAGCGTTTGGCAGATC
AGTTACGTCGAATGGAAGGCGAGCTTGAGAGTCAAATTATTGCGAAGCATGGTTCTGAAAACTCGCGCTACGCAGACTTT
GACCCCTTGGAAATGGACCAATATTCATCGCTGAATCAATTGTCTAAATCCTTAGCCGAATCGGCTTCGGATTTGGTTGA
CTTTAAGAGCACTTTGGCTGAGAAAATTCGTGATGCGGAAGGCTTGTTACTACAACAATCCCGTATTCAAGCGGAAATTC
AAGAAAGCTTAATGCGGACACGTTTAGTGCCGTTCTCACGTATGTTGCCACGTTTGCAGCGTATTGTACGTCAGACTGCA
TCAACCTTAAACCGTCCAACGGAATTGGTTGTCCACAATACCGAAGGTGAATTAGATCGTACGATTCTTGAACGTTTGGT
TACACCGTTTGAGCATATGCTACGTAACGCAATCGACCACGGTATTGAAGATACGGAACAACGTGGCGCTGCGAAAAAAT
CAGCGACAGGCCAAATTGAACTAAACATTAGCCGTCAAGGTACAGATGTTATCGTCAGCTTTAAAGATGATGGTAAGGGT
ATTGATGAAAGCACGATTAAAGCGAAAGCGCTAAATTTAGGTTTAATTAAAGCCGATCAAGTACTAGATAAACAGGAAAT
TTTACAGTTTATTTTCCATCCAGGTTTTAGTACGGCCAAAGAAGTGACGCAAATTTCTGGACGTGGTGTAGGCCTTGATG
TGGTGCAAAGTGAAATTAAAGCACTGGGTGGACATGTCACGGTTGAATCGGAAATTGGACTCGGCACGACCTTCATTATT
CGCGTACCGACTACGGTAGCGGTGAGCGATGCCTTGATGGTGAAAGCCGGTGATCAACAATATGCGATTCCATTGGCGCA
GATTGATCGTATTGTGCGTATTGCTCCAACAGCATTGGATCAGTATTTCCACAGCAAAGATGACCAATTCAAAATTGATG
GTGTGAGTTATAAACTGCGCTATTTATCTGAGTTTTTATCTAATCAGCCGATTCCACGTTTGAGTAATATTGGACATTCA
TTGCCAGTGTTGTTGATTAAAGGCAACAGTGGACAAACCATTGCATTATTAGTCGATCAGCTCATCGGTTCACGTGCGCA
AATTGTAGTGAAGCCAGTTGGACAACAGTTTGCCAGCATTGGTGCAATTGCGGGCGCAACGATTTTGGGTGATGGTCATG
TGTGTTTGATTTTAGATGGTCAGAACATTGCACGTCAGATTTTAAGTACCAAGCGTGTGACGCATGCAGCAGATCATCGT
GACTTTGGTCGCCATCAGGATACACGTCGTTTAGTGATGATTGTGGATGACTCGGTCACGGTTCGTAAGGTCACATCGCG
TTTATTAGAGCGCCAAGGCTTTGATATTGTGACTGCTAAAGACGGTGTCGATGCGATGGAGCAGCTGGAGAGTGTTAAAC
CAGACTTGATGTTGCTGGATATTGAAATGCCACGTATGGATGGTTTTGAAGTAACGAACTTGGTTCGTCACCACGAAATT
CACCAGAACTTGCCGATTATTATGATTACATCGCGTACGGGTGAAAAACACCGTGAACGTGCTTTCAGCTTGGGCGTGAC
GCACTACATGGGCAAACCATTCCAAGAGGCAGAGTTACTTGCCAACATTCAGCAGTTATTGGCTGAAAAGCAGGGGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

60.792

100

0.617