Detailed information NTG0051276

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: G157_RS03165
• Genome accession: NC_022347
• Coordinates: 635588..636532 (-)
• Length: 314 a.a.
• NCBI ID: WP_021033688.1
• Uniprot ID: -
• Organism: Campylobacter coli CVM N29710
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 630588..641532

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G157_RS03130 (G157_03145)	-	630780..630980 (+)	201	WP_002777240.1	cbb3-type cytochrome oxidase assembly protein	-
G157_RS03135 (G157_03150)	-	631010..631309 (-)	300	WP_002777238.1	c-type cytochrome	-
G157_RS03140 (G157_03155)	-	631386..631949 (+)	564	WP_002777235.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
G157_RS03145 (G157_03160)	rfaD	631946..632899 (+)	954	WP_002796912.1	ADP-glyceromanno-heptose 6-epimerase	-
G157_RS03150 (G157_03165)	rfaE1	632892..634277 (+)	1386	WP_002844795.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
G157_RS03155 (G157_03170)	gmhA	634274..634834 (+)	561	WP_002806601.1	D-sedoheptulose 7-phosphate isomerase	-
G157_RS03160 (G157_03175)	-	634834..635595 (+)	762	WP_021033687.1	glycosyltransferase family 25 protein	-
G157_RS03165 (G157_03180)	waaF	635588..636532 (-)	945	WP_021033688.1	lipopolysaccharide heptosyltransferase II	Regulator
G157_RS03170 (G157_03185)	-	636592..637413 (+)	822	WP_002844798.1	glycosyltransferase family 2 protein	-
G157_RS03175 (G157_03190)	-	637456..638823 (+)	1368	WP_002844799.1	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	-
G157_RS03180 (G157_03195)	gmd	638824..639963 (+)	1140	WP_002844800.1	GDP-mannose 4,6-dehydratase	-
G157_RS03185 (G157_03200)	-	639956..640894 (+)	939	WP_002844801.1	NAD-dependent epimerase/dehydratase family protein	-

Sequence

Protein

• Length: 314 a.a.
• Molecular weight: 36126.75 Da
• Isoelectric Point: 10.3770

>NTDB_id=51276 G157_RS03165 WP_021033688.1 635588..636532(-) (waaF) [Campylobacter coli CVM N29710]
MKIFIHLPTWLGDAVMASPALYGVYHHFKNAEFILYGSFVSTALFKEFPNAKIIVENKKSRYKQTLSLRKKLGKIDLALS
FRSALSSKIILHILKAKKRYFFNKYNFKEEHQVLKYLYFIENSLDIKAHSKDLKLPFRLKFQNPIVLKNGKKILGLNPGA
SFGSAKRWDASYFAQVALNFSKTHEILIFGAGKAEQELCDEIFHILKEKNVKVKNLCNKTTIKMLCQNIIFCDIFITNDS
GPMHIAAAYKTKTIAIFGPTKFTQTSPWQNQNTKLVHLNLACMPCMQKTCPLKHHQCMKDLKPEKILEAIRNFT

Nucleotide

• Length: 945 bp

>NTDB_id=51276 G157_RS03165 WP_021033688.1 635588..636532(-) (waaF) [Campylobacter coli CVM N29710]
ATGAAAATTTTTATCCATCTTCCCACTTGGCTAGGCGATGCAGTCATGGCCTCACCTGCTTTATATGGAGTTTATCATCA
TTTTAAAAATGCTGAATTTATCCTTTATGGATCTTTTGTATCTACAGCGCTTTTTAAGGAATTTCCTAATGCTAAAATCA
TTGTAGAAAATAAAAAATCACGCTACAAACAAACCCTTTCTTTACGCAAAAAACTTGGAAAAATCGATCTAGCCCTTTCT
TTTAGATCAGCTCTTTCCTCTAAGATCATTTTGCATATCCTTAAGGCAAAAAAAAGATATTTTTTTAACAAGTATAATTT
CAAAGAAGAACATCAGGTTTTAAAATATCTTTATTTTATAGAAAATTCACTAGATATCAAAGCTCATTCTAAGGATTTAA
AACTCCCTTTTAGATTAAAATTTCAAAATCCTATTGTTTTAAAAAATGGCAAAAAAATCCTAGGCTTAAATCCTGGAGCA
AGTTTTGGAAGTGCTAAAAGATGGGATGCGAGTTATTTTGCACAAGTTGCTTTAAATTTTAGCAAAACTCATGAAATTTT
GATTTTTGGAGCGGGCAAGGCAGAACAAGAACTTTGCGATGAAATTTTTCATATATTAAAAGAAAAAAATGTCAAGGTAA
AAAATCTTTGCAATAAAACCACCATCAAAATGCTTTGTCAAAATATCATTTTTTGTGATATCTTCATCACAAATGATAGT
GGCCCTATGCACATAGCTGCCGCTTATAAAACAAAAACCATAGCTATCTTTGGGCCTACTAAATTTACCCAAACCTCACC
TTGGCAAAATCAAAATACAAAATTAGTACATCTAAATTTAGCTTGTATGCCTTGCATGCAAAAAACCTGCCCTTTAAAAC
ATCATCAGTGTATGAAAGATTTAAAACCGGAAAAAATTTTAGAAGCAATCCGAAATTTTACTTAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (108-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	82.428	99.682	0.822