Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | I6G70_RS04735 | Genome accession | NZ_CP065656 |
| Coordinates | 933252..934226 (+) | Length | 324 a.a. |
| NCBI ID | WP_001831109.1 | Uniprot ID | A0A9Q5JKD6 |
| Organism | Staphylococcus epidermidis strain FDAARGOS_913 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 928252..939226
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6G70_RS04700 (I6G70_04700) | rpmG | 928732..928881 (+) | 150 | WP_001830957.1 | 50S ribosomal protein L33 | - |
| I6G70_RS04705 (I6G70_04705) | - | 929064..929615 (+) | 552 | WP_001831001.1 | 5-formyltetrahydrofolate cyclo-ligase | - |
| I6G70_RS04710 (I6G70_04710) | - | 929616..931076 (+) | 1461 | WP_001832757.1 | rhomboid family protein | - |
| I6G70_RS04715 (I6G70_04715) | - | 931060..931260 (+) | 201 | WP_001831138.1 | YqgQ family protein | - |
| I6G70_RS04720 (I6G70_04720) | - | 931260..932246 (+) | 987 | WP_001831113.1 | ROK family glucokinase | - |
| I6G70_RS04725 (I6G70_04725) | - | 932246..932572 (+) | 327 | WP_001831234.1 | MTH1187 family thiamine-binding protein | - |
| I6G70_RS04730 (I6G70_04730) | - | 932572..933195 (+) | 624 | WP_001831016.1 | MBL fold metallo-hydrolase | - |
| I6G70_RS04735 (I6G70_04735) | comGA | 933252..934226 (+) | 975 | WP_001831109.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| I6G70_RS04740 (I6G70_04740) | comGB | 934198..935265 (+) | 1068 | WP_001831131.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| I6G70_RS04745 (I6G70_04745) | comGC | 935283..935600 (+) | 318 | WP_001831271.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| I6G70_RS04750 (I6G70_04750) | comGD | 935590..936027 (+) | 438 | WP_001831025.1 | competence type IV pilus minor pilin ComGD | - |
| I6G70_RS04755 (I6G70_04755) | - | 936014..936307 (+) | 294 | WP_001831116.1 | hypothetical protein | - |
| I6G70_RS04760 (I6G70_04760) | - | 936231..936722 (+) | 492 | WP_002440043.1 | competence type IV pilus minor pilin ComGF | - |
| I6G70_RS04765 (I6G70_04765) | - | 936887..937399 (+) | 513 | WP_002440040.1 | shikimate kinase | - |
| I6G70_RS04770 (I6G70_04770) | gcvT | 937617..938708 (+) | 1092 | WP_001831107.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 324 a.a. Molecular weight: 37330.44 Da Isoelectric Point: 8.8174
>NTDB_id=512722 I6G70_RS04735 WP_001831109.1 933252..934226(+) (comGA) [Staphylococcus epidermidis strain FDAARGOS_913]
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI
MKILFEQIINHAIKQEASDIHFIPCEEHTIIKLRIKDELTIYDRLSFPIYKKLLIYMKFQSGLDVSTQHRAQSGRYSYKM
KHLYYLRISTLPLSLGNESCVIRIVPQYFQTTRESYEFKDFKHFMKKKQGLLLFSGPTGSGKSTLMYQMVLYAHQKLNLN
VISVEDPVEQILNGITQISVNEKAGINYESSFKAILRCDPDVILIGEIRDSTVAKYVIQASLSGHLVLSTMHANDCKGAL
LRLLEMGISVQELCQAINLISNQRLITTTTNYRQLVSELMFQSQINYFFEHNHSLPKNFTKLATHLNKMSKEGVICEEVV
DKYI
Nucleotide
Download Length: 975 bp
>NTDB_id=512722 I6G70_RS04735 WP_001831109.1 933252..934226(+) (comGA) [Staphylococcus epidermidis strain FDAARGOS_913]
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA
TTGAAAATTTTATTTGAACAGATTATCAATCATGCAATTAAGCAAGAAGCAAGTGACATACACTTTATACCATGTGAGGA
ACACACTATAATTAAGCTAAGAATTAAAGATGAGCTCACAATATATGATAGACTTTCATTTCCAATTTATAAAAAATTAC
TTATATACATGAAGTTTCAATCTGGCTTAGATGTATCAACACAGCATAGAGCACAAAGTGGTAGATATAGTTATAAGATG
AAGCATTTATATTATTTAAGAATCTCTACATTACCTTTATCATTAGGCAATGAAAGTTGTGTAATTCGTATAGTACCTCA
ATACTTCCAAACTACACGAGAATCATATGAATTTAAAGATTTTAAACACTTTATGAAAAAGAAACAAGGTCTACTTTTGT
TTAGTGGACCAACTGGCTCTGGCAAAAGTACTTTAATGTACCAAATGGTCCTTTATGCACATCAAAAATTGAATTTAAAT
GTAATATCAGTTGAAGATCCAGTTGAGCAAATACTTAATGGAATCACACAAATATCAGTCAATGAAAAGGCAGGTATAAA
TTATGAAAGCTCTTTCAAAGCCATTTTAAGGTGTGATCCAGATGTAATTTTAATTGGTGAAATCAGAGATTCTACCGTAG
CTAAATACGTGATTCAAGCCAGTTTAAGCGGGCATTTAGTTTTGTCGACAATGCACGCGAATGATTGCAAGGGAGCACTA
TTACGATTATTAGAAATGGGTATTTCTGTCCAAGAGTTGTGCCAGGCAATCAATTTAATTTCTAATCAAAGATTAATCAC
TACTACTACAAATTATCGTCAACTAGTATCGGAATTAATGTTTCAAAGCCAAATAAATTATTTTTTTGAACATAATCATT
CTTTACCTAAAAATTTCACAAAATTAGCTACACATTTAAACAAAATGTCTAAAGAAGGTGTTATATGTGAAGAAGTTGTC
GATAAATACATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Staphylococcus aureus MW2 |
70.062 |
100 |
0.701 |
| comGA | Staphylococcus aureus N315 |
70.062 |
100 |
0.701 |