Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilP   Type   Machinery gene
Locus tag   I6G71_RS07620 Genome accession   NZ_CP065653
Coordinates   1491612..1492157 (+) Length   181 a.a.
NCBI ID   WP_002214522.1    Uniprot ID   Q7DD77
Organism   Neisseria meningitidis strain FDAARGOS_914     
Function   pseudopilus extrusion and retraction (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1486612..1497157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G71_RS07600 (I6G71_07600) - 1486681..1489077 (-) 2397 WP_002219786.1 penicillin-binding protein 1A -
  I6G71_RS07605 (I6G71_07605) pilM 1489229..1490344 (+) 1116 WP_002214517.1 type IV pilus biogenesis protein PilM -
  I6G71_RS07610 (I6G71_07610) pilN 1490347..1490946 (+) 600 WP_002214520.1 PilN domain-containing protein Machinery gene
  I6G71_RS07615 (I6G71_07615) - 1490947..1491594 (+) 648 WP_002214521.1 type 4a pilus biogenesis protein PilO -
  I6G71_RS07620 (I6G71_07620) pilP 1491612..1492157 (+) 546 WP_002214522.1 pilus assembly protein PilP Machinery gene
  I6G71_RS07625 (I6G71_07625) pilQ 1492176..1494485 (+) 2310 WP_002261352.1 type IV pilus secretin PilQ Machinery gene
  I6G71_RS07630 (I6G71_07630) - 1495663..1496175 (+) 513 WP_002222978.1 shikimate kinase -

Sequence

Protein


Download         Length: 181 a.a.        Molecular weight: 20067.55 Da        Isoelectric Point: 4.6512

>NTDB_id=512692 I6G71_RS07620 WP_002214522.1 1491612..1492157(+) (pilP) [Neisseria meningitidis strain FDAARGOS_914]
MKHYALLISFLALSACSQGSEDLNEWMAQTRREAKAEIIPFQAPTLPVAPVYSPPQLTGPNAFDFRRMETDKKGENAPDT
KRIKETLEKFSLENMRYVGILKSGQKVSGFIEAEGYVYTVGVGNYLGQNYGRIESITDDSIVLNELIEDSTGNWVSRKAE
LLLNSSDKNTEQAAAPAAEQN

Nucleotide


Download         Length: 546 bp        

>NTDB_id=512692 I6G71_RS07620 WP_002214522.1 1491612..1492157(+) (pilP) [Neisseria meningitidis strain FDAARGOS_914]
ATGAAACACTATGCCTTACTCATCAGCTTTCTGGCTCTCTCCGCGTGTTCCCAAGGTTCTGAGGACCTAAACGAATGGAT
GGCACAAACGCGACGCGAAGCCAAAGCAGAAATCATACCTTTCCAAGCACCTACCCTGCCGGTTGCGCCGGTATACAGCC
CGCCGCAGCTTACAGGGCCGAACGCATTCGACTTCCGCCGCATGGAAACCGACAAAAAAGGGGAAAATGCCCCCGACACC
AAGCGTATTAAAGAAACGCTGGAAAAATTCAGTTTGGAAAATATGCGTTATGTCGGCATTTTGAAGTCTGGACAGAAAGT
CTCCGGCTTCATCGAGGCTGAAGGTTATGTCTACACTGTCGGTGTCGGCAACTATTTGGGACAAAACTACGGTAGAATCG
AAAGCATTACCGACGACAGCATCGTCCTGAACGAGCTGATAGAAGACAGCACGGGCAACTGGGTTTCCCGTAAAGCAGAA
CTGCTGTTGAATTCTTCCGACAAAAACACCGAACAAGCGGCAGCACCTGCCGCAGAACAAAATTAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilP (PilP)

(22-163)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  PDB 2IVW
  PDB 4AV2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilP Neisseria meningitidis MC58

100

100

1