Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   I6G75_RS09760 Genome accession   NZ_CP065650
Coordinates   1770961..1771395 (-) Length   144 a.a.
NCBI ID   WP_000811507.1    Uniprot ID   -
Organism   Bacillus cereus strain FDAARGOS_918     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1765961..1776395
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G75_RS09745 (I6G75_09745) - 1766725..1767282 (+) 558 WP_000062080.1 PadR family transcriptional regulator -
  I6G75_RS09750 (I6G75_09750) metE 1768210..1770498 (+) 2289 WP_001007632.1 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase -
  I6G75_RS09755 (I6G75_09755) comJ 1770535..1770924 (-) 390 WP_000424033.1 competence protein ComJ -
  I6G75_RS09760 (I6G75_09760) nucA/comI 1770961..1771395 (-) 435 WP_000811507.1 DNA-entry nuclease Machinery gene
  I6G75_RS09765 (I6G75_09765) - 1771632..1772381 (+) 750 WP_000388464.1 DUF3967 domain-containing protein -
  I6G75_RS09770 (I6G75_09770) kinB 1772435..1773709 (-) 1275 WP_000420389.1 sporulation sensor histidine kinase KinB -
  I6G75_RS09775 (I6G75_09775) - 1774020..1774220 (+) 201 WP_000929283.1 hypothetical protein -
  I6G75_RS09780 (I6G75_09780) - 1774343..1775506 (+) 1164 WP_000434590.1 aminotransferase A -

Sequence

Protein


Download         Length: 144 a.a.        Molecular weight: 15998.32 Da        Isoelectric Point: 8.4331

>NTDB_id=512578 I6G75_RS09760 WP_000811507.1 1770961..1771395(-) (nucA/comI) [Bacillus cereus strain FDAARGOS_918]
MKQLKGIIISIIAILSIVVAVYEVLVPEETSTKKTNAYDQVLEFPKERYPETGKHITDAIKEGHSEVCTIDRGGAADRRK
LSLAPYPSKKGYDRDEWPMAMCKEGGKGAHIEYISPADNRGAGSWVGNKLDKYPDGTRVKFDVK

Nucleotide


Download         Length: 435 bp        

>NTDB_id=512578 I6G75_RS09760 WP_000811507.1 1770961..1771395(-) (nucA/comI) [Bacillus cereus strain FDAARGOS_918]
ATGAAGCAATTAAAAGGTATTATCATTTCAATTATTGCAATTCTTTCTATTGTAGTAGCGGTTTATGAAGTACTTGTTCC
AGAGGAAACAAGTACAAAAAAAACAAATGCGTATGATCAAGTTCTAGAATTTCCAAAAGAGAGATATCCAGAAACAGGGA
AACATATTACGGATGCGATAAAGGAAGGACATTCAGAAGTTTGTACAATCGACCGTGGTGGTGCTGCGGATAGAAGAAAG
TTATCGTTAGCTCCGTACCCATCAAAAAAAGGGTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGCGGAAA
AGGAGCACATATCGAATATATAAGTCCAGCAGATAACCGCGGAGCAGGGTCTTGGGTAGGAAATAAGTTAGATAAATACC
CAGATGGTACGCGTGTGAAATTTGACGTAAAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(48-139)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

70.796

78.472

0.556