Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   I6G80_RS12785 Genome accession   NZ_CP065647
Coordinates   2390005..2390805 (+) Length   266 a.a.
NCBI ID   WP_003183361.1    Uniprot ID   -
Organism   Bacillus licheniformis strain FDAARGOS_923     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 2385005..2395805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G80_RS12765 (I6G80_12765) - 2385027..2385872 (+) 846 WP_003183371.1 TlyA family RNA methyltransferase -
  I6G80_RS12770 (I6G80_12770) ahrC 2386038..2386487 (+) 450 WP_003183369.1 transcriptional regulator AhrC/ArgR -
  I6G80_RS12775 (I6G80_12775) recN 2386519..2388249 (+) 1731 WP_003183366.1 DNA repair protein RecN Machinery gene
  I6G80_RS12780 (I6G80_12780) spoIVB 2388399..2389715 (+) 1317 WP_044051837.1 SpoIVB peptidase -
  I6G80_RS12785 (I6G80_12785) spo0A 2390005..2390805 (+) 801 WP_003183361.1 sporulation transcription factor Spo0A Regulator
  I6G80_RS12790 (I6G80_12790) - 2391178..2391474 (+) 297 WP_003183359.1 antimicrobial peptide LCI -
  I6G80_RS12795 (I6G80_12795) - 2391605..2391988 (+) 384 WP_003183357.1 serine O-acetyltransferase -
  I6G80_RS12800 (I6G80_12800) - 2392319..2393749 (+) 1431 WP_016886315.1 IS1182 family transposase -
  I6G80_RS12805 (I6G80_12805) - 2394023..2394343 (+) 321 WP_003183355.1 hypothetical protein -
  I6G80_RS12810 (I6G80_12810) - 2394379..2394999 (+) 621 WP_101582745.1 N-acetylmuramoyl-L-alanine amidase family protein -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 29541.06 Da        Isoelectric Point: 6.6109

>NTDB_id=512542 I6G80_RS12785 WP_003183361.1 2390005..2390805(+) (spo0A) [Bacillus licheniformis strain FDAARGOS_923]
MEKIKVCVADDNRELVGLLSEYIEGQSDMEVLGVAYNGQECLSLFKDKEPDVLVLDIIMPHLDGLAVLERLRESQLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGSQLTHRAPSSQSSVLRPQPESPKKNLDASITTII
HEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVS
MSKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 801 bp        

>NTDB_id=512542 I6G80_RS12785 WP_003183361.1 2390005..2390805(+) (spo0A) [Bacillus licheniformis strain FDAARGOS_923]
GTGGAGAAAATTAAAGTATGTGTTGCTGATGATAACAGGGAGCTTGTCGGCCTATTAAGCGAATATATCGAGGGACAGAG
CGACATGGAAGTGCTTGGTGTCGCATACAACGGACAGGAATGCCTTTCTTTGTTTAAAGACAAGGAGCCCGACGTGCTTG
TGCTGGATATAATCATGCCTCATCTCGACGGATTGGCCGTTCTTGAAAGGCTGAGGGAATCGCAGCTTAAAAAGCAGCCG
AATGTCATCATGCTGACGGCGTTCGGCCAGGAAGACGTGACCAAAAAAGCTGTAGATTTAGGCGCGTCGTATTTTATTTT
GAAGCCTTTTGACATGGAGAATTTAGTCGGACATATCCGCCAGGTCAGCGGAAACGGATCTCAATTGACACACCGTGCCC
CGTCCTCTCAAAGCAGTGTGCTTCGGCCGCAGCCTGAATCGCCGAAGAAAAACCTGGACGCCAGCATCACGACCATCATC
CACGAAATCGGCGTACCTGCTCATATTAAAGGCTATTTGTACTTAAGAGAAGCCATCTCCATGGTATATAACGACATCGA
ACTGCTCGGCAGCATTACAAAAGTGCTTTATCCGGATATCGCCAAAAAATTCAACACGACTGCAAGCCGCGTCGAACGGG
CGATTCGCCACGCCATCGAAGTCGCATGGAGCAGAGGCAACATCGACTCGATTTCGTCACTTTTCGGCTACACAGTCAGC
ATGTCAAAAGCAAAGCCGACCAATAGTGAGTTCATCGCGATGGTCGCAGACAAGCTGAGACTGGAGCATAAGGCTTCTTA
A

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(156-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

92.135

100

0.925