Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | I6G80_RS06955 | Genome accession | NZ_CP065647 |
| Coordinates | 1320813..1321097 (+) | Length | 94 a.a. |
| NCBI ID | WP_003185421.1 | Uniprot ID | A0A1Y0XQV9 |
| Organism | Bacillus licheniformis strain FDAARGOS_923 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1315942..1368248 | 1320813..1321097 | within | 0 |
Gene organization within MGE regions
Location: 1315942..1368248
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6G80_RS06920 (I6G80_06920) | - | 1315942..1317081 (+) | 1140 | WP_003185439.1 | betaine/proline/choline family ABC transporter ATP-binding protein | - |
| I6G80_RS06925 (I6G80_06925) | - | 1317103..1317756 (+) | 654 | WP_009329612.1 | ABC transporter permease | - |
| I6G80_RS06930 (I6G80_06930) | opuCC | 1317770..1318687 (+) | 918 | WP_009329611.1 | osmoprotectant ABC transporter substrate-binding lipoprotein OpuCC | - |
| I6G80_RS06935 (I6G80_06935) | - | 1318704..1319381 (+) | 678 | WP_003185432.1 | ABC transporter permease | - |
| I6G80_RS06940 (I6G80_06940) | - | 1319429..1319827 (-) | 399 | WP_009329610.1 | helix-turn-helix domain-containing protein | - |
| I6G80_RS06945 (I6G80_06945) | - | 1319997..1320398 (-) | 402 | WP_026080846.1 | transcriptional regulator | - |
| I6G80_RS06950 (I6G80_06950) | - | 1320551..1320784 (+) | 234 | WP_085959538.1 | helix-turn-helix domain-containing protein | - |
| I6G80_RS06955 (I6G80_06955) | abrB | 1320813..1321097 (+) | 285 | WP_003185421.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Regulator |
| I6G80_RS06960 (I6G80_06960) | secG | 1321268..1321498 (+) | 231 | WP_003185418.1 | preprotein translocase subunit SecG | - |
| I6G80_RS06965 (I6G80_06965) | - | 1321639..1322385 (+) | 747 | WP_003185416.1 | alpha/beta hydrolase | - |
| I6G80_RS06970 (I6G80_06970) | rnr | 1322399..1324702 (+) | 2304 | WP_003185414.1 | ribonuclease R | - |
| I6G80_RS06975 (I6G80_06975) | smpB | 1324814..1325287 (+) | 474 | WP_009329604.1 | SsrA-binding protein SmpB | - |
| I6G80_RS06985 (I6G80_06985) | - | 1325839..1326933 (-) | 1095 | WP_017474703.1 | tyrosine-type recombinase/integrase | - |
| I6G80_RS06990 (I6G80_06990) | - | 1327004..1327642 (-) | 639 | WP_069500786.1 | LexA family protein | - |
| I6G80_RS06995 (I6G80_06995) | - | 1327819..1328037 (+) | 219 | WP_003185407.1 | helix-turn-helix domain-containing protein | - |
| I6G80_RS07000 (I6G80_07000) | - | 1328061..1328855 (+) | 795 | WP_011198327.1 | ORF6N domain-containing protein | - |
| I6G80_RS07005 (I6G80_07005) | - | 1328852..1329040 (+) | 189 | WP_003185403.1 | helix-turn-helix transcriptional regulator | - |
| I6G80_RS07010 (I6G80_07010) | - | 1329172..1329360 (+) | 189 | WP_016886536.1 | hypothetical protein | - |
| I6G80_RS07015 (I6G80_07015) | - | 1329419..1329973 (+) | 555 | WP_003185401.1 | hypothetical protein | - |
| I6G80_RS07020 (I6G80_07020) | - | 1330125..1330289 (+) | 165 | WP_017474700.1 | hypothetical protein | - |
| I6G80_RS07025 (I6G80_07025) | - | 1330322..1330492 (+) | 171 | WP_011198326.1 | hypothetical protein | - |
| I6G80_RS07030 (I6G80_07030) | - | 1330484..1330864 (-) | 381 | WP_011198325.1 | DUF2513 domain-containing protein | - |
| I6G80_RS07035 (I6G80_07035) | - | 1330924..1331190 (+) | 267 | WP_011198324.1 | YqaH family protein | - |
| I6G80_RS07040 (I6G80_07040) | - | 1331278..1331520 (+) | 243 | WP_011198322.1 | hypothetical protein | - |
| I6G80_RS07045 (I6G80_07045) | - | 1331613..1332170 (+) | 558 | WP_025807637.1 | host-nuclease inhibitor Gam family protein | - |
| I6G80_RS07050 (I6G80_07050) | - | 1332174..1333109 (+) | 936 | WP_025807635.1 | AAA family ATPase | - |
| I6G80_RS07055 (I6G80_07055) | - | 1333099..1333452 (+) | 354 | WP_017474382.1 | hypothetical protein | - |
| I6G80_RS07060 (I6G80_07060) | - | 1333471..1333911 (+) | 441 | WP_061578359.1 | DUF669 domain-containing protein | - |
| I6G80_RS07065 (I6G80_07065) | - | 1333972..1336404 (+) | 2433 | WP_025807632.1 | phage/plasmid primase, P4 family | - |
| I6G80_RS07070 (I6G80_07070) | - | 1336680..1336943 (+) | 264 | WP_025807631.1 | hypothetical protein | - |
| I6G80_RS07075 (I6G80_07075) | - | 1336921..1337358 (+) | 438 | WP_025807629.1 | hypothetical protein | - |
| I6G80_RS07080 (I6G80_07080) | - | 1337355..1337894 (+) | 540 | WP_025807627.1 | ERCC4 domain-containing protein | - |
| I6G80_RS07085 (I6G80_07085) | - | 1337891..1338061 (+) | 171 | WP_071583658.1 | Fur-regulated basic protein FbpA | - |
| I6G80_RS07090 (I6G80_07090) | - | 1338064..1338579 (+) | 516 | WP_025807625.1 | putative metallopeptidase | - |
| I6G80_RS07095 (I6G80_07095) | - | 1338595..1338972 (+) | 378 | WP_025807623.1 | YopX family protein | - |
| I6G80_RS07100 (I6G80_07100) | - | 1339085..1339465 (+) | 381 | WP_009329244.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| I6G80_RS07105 (I6G80_07105) | - | 1340399..1341121 (+) | 723 | WP_077735605.1 | hypothetical protein | - |
| I6G80_RS07110 (I6G80_07110) | - | 1341181..1341408 (+) | 228 | WP_061578527.1 | hypothetical protein | - |
| I6G80_RS07115 (I6G80_07115) | - | 1341606..1342166 (+) | 561 | WP_077735604.1 | hypothetical protein | - |
| I6G80_RS07120 (I6G80_07120) | - | 1342153..1342467 (+) | 315 | WP_025807615.1 | hypothetical protein | - |
| I6G80_RS07125 (I6G80_07125) | - | 1342494..1342868 (+) | 375 | WP_025807614.1 | HNH endonuclease | - |
| I6G80_RS07130 (I6G80_07130) | - | 1343099..1343614 (+) | 516 | WP_025807612.1 | phage terminase small subunit P27 family | - |
| I6G80_RS07135 (I6G80_07135) | - | 1343611..1345320 (+) | 1710 | WP_025807610.1 | terminase large subunit | - |
| I6G80_RS07140 (I6G80_07140) | - | 1345332..1345523 (+) | 192 | WP_025807608.1 | DUF1056 family protein | - |
| I6G80_RS07145 (I6G80_07145) | - | 1345524..1346834 (+) | 1311 | WP_025807606.1 | phage portal protein | - |
| I6G80_RS07150 (I6G80_07150) | - | 1346779..1347510 (+) | 732 | WP_035317290.1 | head maturation protease, ClpP-related | - |
| I6G80_RS07155 (I6G80_07155) | - | 1347549..1348832 (+) | 1284 | WP_025807602.1 | phage major capsid protein | - |
| I6G80_RS07160 (I6G80_07160) | - | 1348856..1349281 (+) | 426 | WP_003185353.1 | collagen-like protein | - |
| I6G80_RS07165 (I6G80_07165) | - | 1349302..1349604 (+) | 303 | WP_003185351.1 | head-tail connector protein | - |
| I6G80_RS07170 (I6G80_07170) | - | 1349594..1349902 (+) | 309 | WP_003185349.1 | phage head closure protein | - |
| I6G80_RS07175 (I6G80_07175) | - | 1349902..1350300 (+) | 399 | WP_006637249.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| I6G80_RS07180 (I6G80_07180) | - | 1350297..1350680 (+) | 384 | WP_003185344.1 | hypothetical protein | - |
| I6G80_RS07185 (I6G80_07185) | - | 1350695..1351312 (+) | 618 | WP_003185341.1 | major tail protein | - |
| I6G80_RS07190 (I6G80_07190) | gpG | 1351366..1351728 (+) | 363 | WP_003185339.1 | phage tail assembly chaperone G | - |
| I6G80_RS07195 (I6G80_07195) | - | 1351937..1356406 (+) | 4470 | WP_017474880.1 | phage tail tape measure protein | - |
| I6G80_RS07200 (I6G80_07200) | - | 1356406..1357242 (+) | 837 | WP_017474879.1 | phage tail family protein | - |
| I6G80_RS07205 (I6G80_07205) | - | 1357255..1358967 (+) | 1713 | WP_017474878.1 | phage tail protein | - |
| I6G80_RS07210 (I6G80_07210) | - | 1359003..1360958 (+) | 1956 | WP_095266827.1 | right-handed parallel beta-helix repeat-containing protein | - |
| I6G80_RS07215 (I6G80_07215) | - | 1360979..1362343 (+) | 1365 | WP_095266825.1 | phage baseplate upper protein | - |
| I6G80_RS07220 (I6G80_07220) | - | 1362349..1362669 (+) | 321 | WP_224990862.1 | hypothetical protein | - |
| I6G80_RS07225 (I6G80_07225) | - | 1362666..1362851 (+) | 186 | WP_017474870.1 | XkdX family protein | - |
| I6G80_RS07230 (I6G80_07230) | - | 1362914..1363183 (+) | 270 | WP_061578562.1 | hemolysin XhlA family protein | - |
| I6G80_RS07235 (I6G80_07235) | - | 1363199..1363462 (+) | 264 | WP_061578561.1 | phage holin | - |
| I6G80_RS07240 (I6G80_07240) | - | 1363510..1364454 (+) | 945 | WP_025807656.1 | glycoside hydrolase family 25 protein | - |
| I6G80_RS07245 (I6G80_07245) | - | 1364485..1364901 (-) | 417 | WP_006637262.1 | immunity 70 family protein | - |
| I6G80_RS07250 (I6G80_07250) | - | 1364914..1366530 (-) | 1617 | WP_025807654.1 | ribonuclease YeeF family protein | - |
| I6G80_RS07255 (I6G80_07255) | - | 1366723..1366866 (+) | 144 | WP_021837703.1 | hypothetical protein | - |
| I6G80_RS07260 (I6G80_07260) | - | 1367121..1367351 (+) | 231 | WP_025807652.1 | helix-turn-helix domain-containing protein | - |
| I6G80_RS07265 (I6G80_07265) | - | 1367601..1368248 (+) | 648 | WP_025807650.1 | Panacea domain-containing protein | - |
Sequence
Protein
Download Length: 94 a.a. Molecular weight: 10486.36 Da Isoelectric Point: 7.9620
>NTDB_id=512521 I6G80_RS06955 WP_003185421.1 1320813..1321097(+) (abrB) [Bacillus licheniformis strain FDAARGOS_923]
MKNTGIVRRIDELGRVVLPVEMRRVLNINEKDPLEIYTDGENIILTKYAANMACLMTGDITTKNKTYAGGKIVLSPRGAE
MLLEDMMAALSEKK
MKNTGIVRRIDELGRVVLPVEMRRVLNINEKDPLEIYTDGENIILTKYAANMACLMTGDITTKNKTYAGGKIVLSPRGAE
MLLEDMMAALSEKK
Nucleotide
Download Length: 285 bp
>NTDB_id=512521 I6G80_RS06955 WP_003185421.1 1320813..1321097(+) (abrB) [Bacillus licheniformis strain FDAARGOS_923]
GTGAAAAATACCGGGATTGTCCGGAGAATCGATGAGCTCGGCAGAGTCGTTCTCCCGGTCGAAATGCGCAGGGTGCTGAA
TATCAATGAAAAGGACCCGCTCGAAATATATACCGACGGCGAAAACATCATTTTGACAAAATACGCCGCAAACATGGCAT
GTTTGATGACCGGCGACATCACCACGAAAAATAAAACGTATGCGGGCGGCAAAATCGTACTCAGCCCGCGCGGAGCGGAA
ATGCTCCTGGAAGATATGATGGCGGCACTGTCAGAAAAGAAATAA
GTGAAAAATACCGGGATTGTCCGGAGAATCGATGAGCTCGGCAGAGTCGTTCTCCCGGTCGAAATGCGCAGGGTGCTGAA
TATCAATGAAAAGGACCCGCTCGAAATATATACCGACGGCGAAAACATCATTTTGACAAAATACGCCGCAAACATGGCAT
GTTTGATGACCGGCGACATCACCACGAAAAATAAAACGTATGCGGGCGGCAAAATCGTACTCAGCCCGCGCGGAGCGGAA
ATGCTCCTGGAAGATATGATGGCGGCACTGTCAGAAAAGAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
56.044 |
96.809 |
0.543 |