Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   I6G82_RS21475 Genome accession   NZ_CP065643
Coordinates   4354458..4355408 (+) Length   316 a.a.
NCBI ID   WP_053996910.1    Uniprot ID   A0A0M9DGI3
Organism   Lysinibacillus macroides strain FDAARGOS_925     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 4349458..4360408
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G82_RS21455 (I6G82_21395) - 4350008..4351156 (+) 1149 WP_053996906.1 M20 peptidase aminoacylase family protein -
  I6G82_RS21460 (I6G82_21400) - 4351156..4351980 (+) 825 WP_053996907.1 GNAT family N-acetyltransferase -
  I6G82_RS21465 (I6G82_21405) menC 4352003..4353121 (+) 1119 WP_053996908.1 o-succinylbenzoate synthase -
  I6G82_RS21470 (I6G82_21410) - 4353140..4354195 (+) 1056 WP_053996909.1 hypothetical protein -
  I6G82_RS21475 (I6G82_21415) ceuB 4354458..4355408 (+) 951 WP_053996910.1 ABC transporter permease Machinery gene
  I6G82_RS21480 (I6G82_21420) - 4355401..4356354 (+) 954 WP_053996911.1 iron chelate uptake ABC transporter family permease subunit -
  I6G82_RS21485 (I6G82_21425) - 4356351..4357112 (+) 762 WP_053996912.1 ABC transporter ATP-binding protein -
  I6G82_RS21490 (I6G82_21430) - 4357174..4358202 (+) 1029 WP_053996913.1 siderophore ABC transporter substrate-binding protein -
  I6G82_RS21495 (I6G82_21435) - 4358204..4358518 (+) 315 WP_053996914.1 antibiotic biosynthesis monooxygenase family protein -
  I6G82_RS21500 (I6G82_21440) - 4358694..4359242 (-) 549 WP_053996915.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34903.08 Da        Isoelectric Point: 10.1462

>NTDB_id=512498 I6G82_RS21475 WP_053996910.1 4354458..4355408(+) (ceuB) [Lysinibacillus macroides strain FDAARGOS_925]
MKIRYLLTATIVLSIVSLFIGVADIKPSDLLDFHSEETRLFLISRVPRLVAILLAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDATRLGVLISMMFFTNVTYFQKISFAFIFALAGTLLFMQILNRIKFKDAIFIPLIGLMYGNILSSVTTFFAYKANII
QNISAWLQGDFSLIMKGRYELLYISVPVLILAYIYANRFTVAGMGEDFAKNLGLSYKFVMNFGLVLVALISTTVVLTVGL
IPFLGLIIPNIISLFKGDNLAKTLPHTALLGMSFLLFCDILGRVLIFPYEIPISMTVGVIGSAIFLFMLFRGRAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=512498 I6G82_RS21475 WP_053996910.1 4354458..4355408(+) (ceuB) [Lysinibacillus macroides strain FDAARGOS_925]
ATGAAAATAAGATATCTTTTAACAGCAACGATTGTGCTGTCTATTGTGTCACTATTTATCGGTGTAGCCGATATTAAACC
AAGTGATCTATTAGACTTCCACTCAGAAGAAACGAGACTGTTTTTAATTAGTCGTGTACCTAGGCTTGTAGCAATTTTGC
TGGCAGGTGCAGGTATGAGTATTGCTGGTTTAATTATGCAAAGCTTAAGTAGGAATAAGTTCGTATCGCCAACAACAGCG
GGTACTTTAGATGCCACTAGATTAGGTGTTTTGATTTCGATGATGTTTTTTACAAATGTCACGTATTTTCAAAAAATTTC
CTTCGCTTTCATATTTGCTTTAGCCGGCACACTATTATTTATGCAAATATTAAATCGAATTAAGTTTAAAGATGCGATCT
TTATACCACTTATTGGCTTAATGTACGGAAATATTTTATCGTCGGTTACAACATTTTTTGCGTATAAGGCGAATATTATC
CAAAACATTTCTGCATGGTTACAAGGAGATTTCTCATTAATCATGAAAGGTCGCTATGAACTGTTATACATAAGTGTACC
AGTACTTATTTTAGCTTACATTTATGCAAATCGCTTTACAGTGGCTGGAATGGGCGAAGATTTTGCTAAAAACCTTGGGC
TTTCCTATAAATTTGTGATGAACTTTGGGTTAGTATTAGTAGCGCTGATCTCAACAACAGTGGTGCTGACAGTTGGCTTA
ATACCTTTTCTTGGTTTGATCATTCCGAATATTATTTCACTGTTTAAAGGTGATAATTTAGCAAAAACATTGCCGCATAC
AGCATTGCTTGGCATGTCCTTCTTGTTATTCTGTGATATTTTAGGGCGCGTACTTATCTTCCCTTATGAAATACCAATTA
GTATGACGGTTGGTGTTATCGGAAGTGCGATCTTCCTATTCATGCTGTTTAGGGGGAGAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M9DGI3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.215

100

0.522