Detailed information NTG0512292

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: I6G96_RS13680
• Genome accession: NZ_CP065627
• Coordinates: 3028746..3029966 (-)
• Length: 406 a.a.
• NCBI ID: WP_197945107.1
• Uniprot ID: -
• Organism: Delftia acidovorans strain FDAARGOS_939
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3023746..3034966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6G96_RS13665 (I6G96_13665)	-	3024608..3025579 (-)	972	WP_197945104.1	hypothetical protein	-
I6G96_RS13670 (I6G96_13670)	-	3025590..3026717 (-)	1128	WP_197945105.1	hypothetical protein	-
I6G96_RS13675 (I6G96_13675)	-	3027062..3027799 (-)	738	WP_232245314.1	GntR family transcriptional regulator	-
I6G96_RS13680 (I6G96_13680)	pilA	3028746..3029966 (-)	1221	WP_197945107.1	signal recognition particle-docking protein FtsY	Machinery gene
I6G96_RS13685 (I6G96_13685)	-	3029995..3031473 (+)	1479	WP_013803936.1	M16 family metallopeptidase	-
I6G96_RS13690 (I6G96_13690)	-	3031500..3032861 (+)	1362	WP_013803935.1	M16 family metallopeptidase	-
I6G96_RS13695 (I6G96_13695)	rsmD	3032858..3033568 (+)	711	WP_012203729.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
I6G96_RS13700 (I6G96_13700)	coaD	3033700..3034200 (+)	501	WP_013803934.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 406 a.a.
• Molecular weight: 42442.35 Da
• Isoelectric Point: 5.7832

>NTDB_id=512292 I6G96_RS13680 WP_197945107.1 3028746..3029966(-) (pilA) [Delftia acidovorans strain FDAARGOS_939]
MFSFFKKKPTPSAAEISPTDSSAAPEKAGIPATPPQDSPPALPPAAPAAPAADTGSAWWRKPFGGGKGDAAPPETPPAPA
AAPASTVAPADFIAAPEPTAKPEAEGASRQNWMQRLKTGLRKTGSSIATVFTGTQINDALYEELEDALLMADTGVKATEH
LLADLRRRVKEAKATDPAAVKALLADALADLLRPLEKPLVIGEHQPTVIMVAGVNGAGKTTSIGKLTRHLADEGQSVLLA
AADTFRAAAREQLGVWANRNTVEIVSQEGGDPAAVSFDAVTAGRARKKDVVLVDTAGRLPTQLHLMEELRKIRRVVSKAD
ATAPHEVLLVIDGNTGQNALAQVRAFDDALQLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKVEDLETFNAREF
AQALLS

Nucleotide

• Length: 1221 bp

>NTDB_id=512292 I6G96_RS13680 WP_197945107.1 3028746..3029966(-) (pilA) [Delftia acidovorans strain FDAARGOS_939]
ATGTTCAGTTTTTTCAAGAAAAAGCCCACCCCCTCCGCCGCCGAGATTTCCCCGACGGACAGCAGCGCCGCGCCTGAAAA
GGCCGGCATTCCCGCAACCCCACCGCAGGACAGCCCCCCTGCCCTGCCACCGGCCGCACCAGCAGCGCCGGCCGCCGACA
CCGGCAGTGCCTGGTGGCGCAAGCCCTTTGGCGGCGGCAAGGGCGATGCCGCGCCCCCCGAGACCCCGCCTGCCCCAGCT
GCTGCACCCGCGTCCACCGTCGCGCCTGCGGACTTCATTGCCGCGCCCGAGCCCACGGCCAAGCCCGAGGCCGAAGGTGC
CAGCCGCCAGAACTGGATGCAGCGCCTCAAGACCGGCCTGCGCAAGACCGGCAGCAGCATTGCCACGGTCTTCACGGGCA
CGCAGATCAACGATGCGCTGTACGAGGAACTGGAAGACGCCCTGCTGATGGCCGACACCGGCGTCAAGGCCACCGAGCAC
CTGCTCGCCGACCTGCGCCGCCGCGTCAAGGAGGCCAAGGCCACCGACCCCGCCGCCGTCAAGGCGCTGCTGGCCGATGC
CCTGGCCGACCTGCTGCGCCCGCTGGAAAAGCCGCTGGTCATCGGCGAGCACCAGCCCACCGTGATCATGGTCGCTGGCG
TCAACGGCGCGGGCAAGACCACCTCCATCGGCAAGCTGACCCGTCACCTGGCCGACGAAGGCCAGAGCGTGCTGCTGGCC
GCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTTGGCGTCTGGGCCAACCGCAACACGGTGGAGATCGTCAGCCA
GGAAGGGGGCGATCCTGCAGCCGTGAGCTTTGACGCCGTCACCGCCGGCCGCGCGCGCAAGAAGGATGTGGTGCTGGTGG
ACACGGCAGGCCGCCTGCCCACCCAGCTGCACCTGATGGAAGAGCTGCGCAAGATCCGCCGCGTGGTCAGCAAGGCCGAC
GCCACGGCACCCCATGAGGTGCTGCTGGTCATCGACGGCAACACCGGCCAGAACGCGCTGGCCCAGGTGCGCGCCTTCGA
CGATGCGCTGCAGCTCACGGGCCTGATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGCGTGCTGGCTGCCATTGCCC
AGGAACGGCCGATCCCCGTGTACTTCATCGGCGTGGGCGAAAAGGTCGAGGACCTGGAAACCTTCAACGCCCGAGAATTC
GCGCAGGCGCTGCTGTCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (206-405)

• SRP54-type protein, helical bundle domain (SRP54_N) (125-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.289	100	0.512