Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   I6G96_RS13100 Genome accession   NZ_CP065627
Coordinates   2904423..2904821 (+) Length   132 a.a.
NCBI ID   WP_012203501.1    Uniprot ID   A0A210VYJ7
Organism   Delftia acidovorans strain FDAARGOS_939     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2899423..2909821
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6G96_RS13070 (I6G96_13070) - 2899552..2900073 (+) 522 WP_197945057.1 c-type cytochrome -
  I6G96_RS13075 (I6G96_13075) - 2900076..2900678 (+) 603 WP_197945058.1 DNA-3-methyladenine glycosylase I -
  I6G96_RS13080 (I6G96_13080) - 2901304..2901702 (+) 399 WP_043824200.1 hypothetical protein -
  I6G96_RS13085 (I6G96_13085) hemL 2901774..2903090 (-) 1317 WP_373681038.1 glutamate-1-semialdehyde 2,1-aminomutase -
  I6G96_RS13090 (I6G96_13090) thiD 2903151..2904107 (-) 957 WP_012203499.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  I6G96_RS13095 (I6G96_13095) - 2904223..2904375 (+) 153 WP_013804031.1 rubredoxin -
  I6G96_RS13100 (I6G96_13100) pilG 2904423..2904821 (+) 399 WP_012203501.1 response regulator Regulator
  I6G96_RS13105 (I6G96_13105) - 2904821..2905186 (+) 366 WP_013804030.1 response regulator -
  I6G96_RS13110 (I6G96_13110) - 2905202..2905729 (+) 528 WP_012203503.1 chemotaxis protein CheW -
  I6G96_RS13115 (I6G96_13115) - 2905748..2907997 (+) 2250 WP_012203504.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14616.85 Da        Isoelectric Point: 6.9242

>NTDB_id=512291 I6G96_RS13100 WP_012203501.1 2904423..2904821(+) (pilG) [Delftia acidovorans strain FDAARGOS_939]
MTTSGAPLRVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALSKVNDYQPQLIFCDILMPKLDGYQTCAIIKRNARFS
DTPVVMLSSKDGVFDKARGRMVGCQDYLTKPFTKDQLLQAVEQFGKQTIGAL

Nucleotide


Download         Length: 399 bp        

>NTDB_id=512291 I6G96_RS13100 WP_012203501.1 2904423..2904821(+) (pilG) [Delftia acidovorans strain FDAARGOS_939]
GTGACGACATCGGGCGCACCCTTGCGCGTACTCGTGGTGGATGACAGCAATACCATCCGCCGCAGCGCAGAAATCTTCCT
CAAACAGGGCGGGCACGAAGTGCTCCTGGCCGACGACGGCTTCGACGCACTGTCCAAAGTCAACGACTATCAGCCCCAGC
TGATCTTCTGCGACATCCTCATGCCCAAGCTGGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACGCGCGCTTCTCC
GATACGCCCGTGGTCATGCTCTCGTCCAAGGACGGCGTATTCGACAAGGCGCGCGGGCGCATGGTGGGCTGCCAGGACTA
CCTCACGAAACCCTTCACCAAAGACCAGCTGCTGCAGGCCGTGGAGCAGTTCGGCAAGCAAACCATAGGAGCACTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A210VYJ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

58.772

86.364

0.508