Detailed information NTG0512166

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: I6H06_RS24885
• Genome accession: NZ_CP065601
• Coordinates: 2847334..2848503 (-)
• Length: 389 a.a.
• NCBI ID: WP_015877057.1
• Uniprot ID: A0AAQ0BUH7
• Organism: Burkholderia glumae strain FDAARGOS_949
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2842334..2853503

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6H06_RS24865 (I6H06_24805)	-	2842532..2843101 (+)	570	WP_015877061.1	acyloxyacyl hydrolase	-
I6H06_RS24870 (I6H06_24810)	-	2843141..2843527 (+)	387	WP_015877060.1	nuclear transport factor 2 family protein	-
I6H06_RS24875 (I6H06_24815)	leuA	2843724..2845373 (-)	1650	WP_015877059.1	2-isopropylmalate synthase	-
I6H06_RS24880 (I6H06_24820)	ybiB	2845787..2846764 (-)	978	WP_015877058.1	DNA-binding protein YbiB	-
I6H06_RS24885 (I6H06_24825)	pilA	2847334..2848503 (-)	1170	WP_015877057.1	signal recognition particle-docking protein FtsY	Machinery gene
I6H06_RS24890 (I6H06_24830)	rsmD	2848691..2849305 (+)	615	WP_035983602.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
I6H06_RS24895 (I6H06_24835)	coaD	2849416..2849916 (+)	501	WP_015877055.1	pantetheine-phosphate adenylyltransferase	-
I6H06_RS24900 (I6H06_24840)	-	2850061..2851383 (-)	1323	WP_015877054.1	TIGR00366 family protein	-
I6H06_RS24905 (I6H06_24845)	-	2851673..2851942 (+)	270	WP_015877053.1	YfhL family 4Fe-4S dicluster ferredoxin	-
I6H06_RS24910 (I6H06_24850)	hisC	2852006..2853073 (-)	1068	WP_035983605.1	histidinol-phosphate transaminase	-

Sequence

Protein

• Length: 389 a.a.
• Molecular weight: 40622.57 Da
• Isoelectric Point: 5.4803

>NTDB_id=512166 I6H06_RS24885 WP_015877057.1 2847334..2848503(-) (pilA) [Burkholderia glumae strain FDAARGOS_949]
MFSFFKRLIGSKADDASQDAPAADEQASAAHAPDAAGHAAAAASRPAPAPAHDAEPAASPAAPVPAAPAPAAVPAAPAVE
VVPPPAPEPAAKKSWIARLRSGLSKTSTSLTNVFVNTRIDDELYEELEAALLMSDAGIDATEYLLGALREKVRAERLSDP
LQVKAALRALLVDLLAPLEKSLMLGRAQPLVMMIAGVNGAGKTTSIGKLAKHLQRFDQSVLLAAGDTFRAAAREQLAIWG
ERNNVTVVQQESGDPAAVIFDAVGAARARKIDVVMADTAGRLPTQLHLMEELRKVKRVIGKAQSDAPHEVLLVIDANTGQ
NALAQVKAFDDALGLTGLIVTKLDGTAKGGILAAIARQRPIPVYFIGVGEKVEDLQPFNAEEFADALLG

Nucleotide

• Length: 1170 bp

>NTDB_id=512166 I6H06_RS24885 WP_015877057.1 2847334..2848503(-) (pilA) [Burkholderia glumae strain FDAARGOS_949]
ATGTTCAGCTTCTTCAAACGATTGATCGGCTCGAAGGCCGACGACGCGTCGCAGGACGCGCCGGCGGCCGACGAGCAAGC
CAGCGCGGCTCACGCGCCGGACGCGGCCGGGCATGCCGCCGCCGCGGCGAGCCGGCCGGCGCCCGCGCCGGCACACGACG
CCGAACCCGCCGCCAGCCCGGCTGCACCGGTGCCGGCCGCCCCCGCCCCTGCGGCCGTGCCCGCCGCCCCCGCCGTCGAA
GTCGTGCCGCCGCCCGCGCCTGAGCCGGCCGCGAAAAAATCCTGGATCGCACGACTACGCTCCGGGCTCTCGAAGACGAG
CACGAGCCTCACCAACGTGTTCGTCAATACCAGGATCGACGACGAACTCTACGAGGAGCTCGAAGCCGCGCTGCTGATGT
CCGATGCCGGCATCGACGCGACCGAATACCTGCTCGGCGCGCTGCGCGAGAAGGTGCGCGCCGAACGCCTGAGCGATCCG
CTGCAGGTGAAGGCCGCGCTGCGCGCGCTGCTCGTCGACCTGCTCGCGCCGCTCGAGAAATCGCTGATGCTGGGCCGCGC
CCAGCCGCTCGTGATGATGATCGCGGGCGTCAACGGAGCCGGCAAGACCACCAGCATCGGTAAGCTCGCCAAACACCTGC
AGCGCTTCGACCAATCGGTGCTGCTGGCCGCCGGCGACACGTTCCGCGCGGCCGCGCGCGAGCAGCTCGCGATCTGGGGC
GAGCGCAACAACGTGACCGTGGTGCAGCAGGAAAGCGGCGATCCGGCCGCCGTGATATTCGATGCGGTCGGCGCCGCGCG
CGCGCGCAAGATCGACGTGGTGATGGCCGACACCGCGGGCCGGTTGCCCACGCAGTTGCACCTGATGGAGGAACTGCGCA
AGGTCAAGCGCGTGATCGGCAAGGCGCAGAGCGACGCGCCGCACGAGGTGCTGCTCGTGATCGACGCCAATACCGGCCAG
AACGCGCTCGCCCAGGTGAAGGCATTCGACGACGCGCTGGGCCTGACCGGGCTCATCGTCACCAAGCTCGACGGCACCGC
GAAGGGCGGCATTCTCGCCGCGATCGCGCGGCAGCGGCCGATACCCGTCTACTTCATCGGCGTCGGCGAGAAGGTCGAGG
ACTTGCAGCCGTTCAACGCCGAGGAATTCGCCGACGCGCTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (108-168)

• SRP54-type protein, GTPase domain (SRP54) (190-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.82	100	0.558