Detailed information NTG0051214

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: MUS_RS01930
• Genome accession: NC_017912
• Coordinates: 382926..384074 (+)
• Length: 382 a.a.
• NCBI ID: WP_014304340.1
• Uniprot ID: I2C1C2
• Organism: Bacillus velezensis YAU B9601-Y2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 377926..389074

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUS_RS01910 (MUS_0358)	-	378326..379009 (-)	684	WP_014416899.1	ABC transporter ATP-binding protein	-
MUS_RS01915 (MUS_0359)	-	379024..380457 (-)	1434	WP_014416900.1	ABC transporter permease	-
MUS_RS01920 (MUS_0361)	-	380670..381353 (+)	684	WP_014416901.1	response regulator transcription factor	-
MUS_RS01925 (MUS_0362)	-	381340..382767 (+)	1428	WP_088056326.1	HAMP domain-containing sensor histidine kinase	-
MUS_RS01930 (MUS_0364)	rapC	382926..384074 (+)	1149	WP_014304340.1	Rap family tetratricopeptide repeat protein	Regulator
MUS_RS01935 (MUS_0365)	phrC	384058..384177 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
MUS_RS20890	-	384328..384423 (-)	96	WP_021495118.1	YjcZ family sporulation protein	-
MUS_RS01945 (MUS_0366)	-	384518..385882 (-)	1365	WP_014416903.1	aspartate kinase	-
MUS_RS01950 (MUS_0368)	ceuB	386296..387249 (+)	954	WP_014416904.1	ABC transporter permease	Machinery gene
MUS_RS01955 (MUS_0369)	-	387239..388186 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
MUS_RS01960 (MUS_0370)	-	388180..388938 (+)	759	WP_012116804.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45494.75 Da
• Isoelectric Point: 4.9939

>NTDB_id=51214 MUS_RS01930 WP_014304340.1 382926..384074(+) (rapC) [Bacillus velezensis YAU B9601-Y2]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=51214 MUS_RS01930 WP_014304340.1 382926..384074(+) (rapC) [Bacillus velezensis YAU B9601-Y2]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAAGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATATACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

• Tetratricopeptide repeat (TPR_12) (223-294)

3D structure

• AlphaFold DB: I2C1C2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568