Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   I4W80_RS05610 Genome accession   NZ_CP065591
Coordinates   1117627..1117824 (+) Length   65 a.a.
NCBI ID   WP_008348507.1    Uniprot ID   A0A9X0FWQ1
Organism   Bacillus altitudinis strain 1817     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1112627..1122824
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I4W80_RS05580 (I4W80_05580) - 1113027..1113206 (+) 180 WP_008348517.1 YjzC family protein -
  I4W80_RS05585 (I4W80_05585) - 1113376..1114641 (+) 1266 WP_007499050.1 MFS transporter -
  I4W80_RS05590 (I4W80_05590) - 1114761..1114955 (-) 195 WP_008348514.1 YjzD family protein -
  I4W80_RS05595 (I4W80_05595) - 1115168..1115908 (+) 741 WP_007499048.1 hypothetical protein -
  I4W80_RS05600 (I4W80_05600) - 1115984..1116559 (+) 576 WP_017360175.1 hypothetical protein -
  I4W80_RS05605 (I4W80_05605) med 1116650..1117615 (+) 966 WP_017360174.1 BMP family ABC transporter substrate-binding protein Regulator
  I4W80_RS05610 (I4W80_05610) comZ 1117627..1117824 (+) 198 WP_008348507.1 ComZ family protein Regulator
  I4W80_RS05615 (I4W80_05615) - 1118027..1118260 (-) 234 WP_060832239.1 hypothetical protein -
  I4W80_RS05620 (I4W80_05620) - 1118430..1119368 (+) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  I4W80_RS05625 (I4W80_05625) fabF 1119390..1120631 (+) 1242 WP_007499040.1 beta-ketoacyl-ACP synthase II -
  I4W80_RS05630 (I4W80_05630) - 1120709..1121503 (+) 795 WP_076821877.1 DUF2268 domain-containing protein -
  I4W80_RS05635 (I4W80_05635) - 1121674..1122654 (+) 981 WP_039963422.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7318.37 Da        Isoelectric Point: 4.3178

>NTDB_id=512104 I4W80_RS05610 WP_008348507.1 1117627..1117824(+) (comZ) [Bacillus altitudinis strain 1817]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=512104 I4W80_RS05610 WP_008348507.1 1117627..1117824(+) (comZ) [Bacillus altitudinis strain 1817]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662