Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   I4W80_RS05225 Genome accession   NZ_CP065591
Coordinates   1036232..1037182 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain 1817     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1031232..1042182
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I4W80_RS05205 (I4W80_05205) - 1032468..1032950 (+) 483 WP_146269903.1 hypothetical protein -
  I4W80_RS05210 (I4W80_05210) - 1032981..1034420 (-) 1440 WP_206116120.1 PLP-dependent aminotransferase family protein -
  I4W80_RS05215 (I4W80_05215) - 1034564..1035733 (+) 1170 WP_017360232.1 MFS transporter -
  I4W80_RS05220 (I4W80_05220) - 1035796..1036074 (+) 279 WP_017360231.1 barstar family protein -
  I4W80_RS05225 (I4W80_05225) ceuB 1036232..1037182 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  I4W80_RS05230 (I4W80_05230) - 1037175..1038125 (+) 951 WP_017366965.1 iron chelate uptake ABC transporter family permease subunit -
  I4W80_RS05235 (I4W80_05235) - 1038116..1038874 (+) 759 WP_017366966.1 ABC transporter ATP-binding protein -
  I4W80_RS05240 (I4W80_05240) - 1038897..1039841 (+) 945 WP_017366967.1 siderophore ABC transporter substrate-binding protein -
  I4W80_RS05245 (I4W80_05245) - 1039980..1040936 (+) 957 WP_008348636.1 LCP family protein -
  I4W80_RS05250 (I4W80_05250) - 1040971..1041405 (-) 435 WP_116306680.1 enoyl-CoA hydratase -
  I4W80_RS05255 (I4W80_05255) - 1041491..1041853 (-) 363 WP_008348633.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=512100 I4W80_RS05225 WP_017366964.1 1036232..1037182(+) (ceuB) [Bacillus altitudinis strain 1817]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=512100 I4W80_RS05225 WP_017366964.1 1036232..1037182(+) (ceuB) [Bacillus altitudinis strain 1817]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAGTTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ATGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTACCTTTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTTCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGAGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494