Detailed information NTG0512085

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: H5J24_RS22565
• Genome accession: NZ_CP065589
• Coordinates: 4711607..4712716 (+)
• Length: 369 a.a.
• NCBI ID: WP_068940833.1
• Uniprot ID: -
• Organism: Chryseobacterium capnotolerans isolate DH-B6
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 4706607..4717716

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H5J24_RS22540 (H5J24_21840)	-	4706669..4707061 (+)	393	WP_068940822.1	four helix bundle protein	-
H5J24_RS22545 (H5J24_21845)	sufD	4707096..4708403 (+)	1308	WP_068940824.1	Fe-S cluster assembly protein SufD	-
H5J24_RS22550 (H5J24_21850)	-	4708481..4709404 (-)	924	WP_068940826.1	DUF3078 domain-containing protein	-
H5J24_RS22555 (H5J24_21855)	-	4709633..4710559 (-)	927	WP_068940941.1	DUF3078 domain-containing protein	-
H5J24_RS22560 (H5J24_21860)	-	4710807..4711574 (+)	768	WP_068940831.1	rhomboid family intramembrane serine protease	-
H5J24_RS22565 (H5J24_21865)	dprA	4711607..4712716 (+)	1110	WP_068940833.1	DNA-processing protein DprA	Machinery gene
H5J24_RS22570 (H5J24_21870)	gdhA	4712907..4714265 (+)	1359	WP_068940834.1	NADP-specific glutamate dehydrogenase	-
H5J24_RS22575 (H5J24_21875)	-	4714398..4714766 (+)	369	WP_096788273.1	DUF1801 domain-containing protein	-
H5J24_RS22580 (H5J24_21880)	-	4714811..4715122 (-)	312	WP_068940837.1	hypothetical protein	-
H5J24_RS22585 (H5J24_21885)	-	4715409..4715897 (-)	489	WP_068940839.1	YkgJ family cysteine cluster protein	-
H5J24_RS22590 (H5J24_21890)	-	4715898..4716869 (-)	972	WP_068940842.1	ion channel	-
H5J24_RS22595 (H5J24_21895)	-	4717013..4717393 (+)	381	WP_068940844.1	group III truncated hemoglobin	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 41315.27 Da
• Isoelectric Point: 7.8584

>NTDB_id=512085 H5J24_RS22565 WP_068940833.1 4711607..4712716(+) (dprA) [Chryseobacterium capnotolerans isolate DH-B6]
MISEEYLYAIALRESSLIGDINFHKLVRTFGSAENAWKKAKREYRKLEGIGQKTVADIGNENHLKFAEKELIFCEKNNIR
IRLRHLDQVPTLLNECIDAPSILYQKGNIDESLQKISIVGTRNMTAYGKQFIGDFFDATQSSKYVSVSGLALGVDKEVHE
QSIRSQKPTIAVLAHGFEFLYPAKNRKLSEKIIQEGGVLLTEFNSTRKPDRENFIQRNRIVAGLSPATIVVETGFGGGSV
STAAFANDYNREVFALPGKITDVHSQGCNQLILHNKATAISTLKDLISMLGFNNPKEKIAELFPYSEPAIQLTDNQQTVY
QFIKQNPQISLDDLAQEIDIPSHKILPIILELELLGKVKSFSGRQFIAN

Nucleotide

• Length: 1110 bp

>NTDB_id=512085 H5J24_RS22565 WP_068940833.1 4711607..4712716(+) (dprA) [Chryseobacterium capnotolerans isolate DH-B6]
ATGATCTCCGAAGAATATTTATATGCCATCGCTTTACGCGAAAGCAGTCTGATTGGTGACATCAATTTCCATAAACTTGT
GAGAACTTTTGGAAGTGCTGAAAATGCATGGAAAAAAGCAAAAAGAGAATACAGAAAATTAGAAGGTATAGGACAAAAAA
CAGTTGCTGATATTGGTAATGAAAACCATCTGAAGTTTGCCGAAAAAGAACTGATATTTTGCGAAAAGAACAATATCCGA
ATCAGATTAAGACATCTTGATCAGGTTCCCACTCTTCTTAATGAATGCATAGATGCTCCTTCTATCCTTTACCAAAAAGG
AAATATTGATGAATCTCTTCAAAAGATAAGCATCGTTGGGACCCGAAATATGACAGCTTATGGCAAACAATTTATCGGAG
ACTTTTTTGATGCCACTCAATCTTCAAAATATGTTTCTGTGAGCGGTCTTGCTTTAGGGGTAGACAAAGAAGTTCATGAA
CAGTCTATCCGAAGTCAGAAACCTACCATCGCTGTTCTCGCTCATGGTTTCGAATTTTTATATCCAGCCAAAAACAGAAA
ACTGTCAGAGAAAATTATTCAGGAAGGCGGAGTCTTATTGACAGAATTCAATTCAACAAGAAAACCGGATCGGGAAAACT
TTATCCAAAGAAACAGAATTGTAGCTGGCCTTTCTCCTGCAACGATTGTTGTAGAAACAGGATTTGGAGGCGGATCTGTA
AGCACAGCTGCTTTTGCTAATGATTATAACAGAGAGGTCTTTGCACTTCCGGGAAAAATCACAGATGTTCATAGCCAAGG
TTGTAATCAATTGATTTTGCATAACAAAGCAACTGCTATTTCTACCCTCAAAGATTTGATAAGTATGCTGGGCTTCAATA
ATCCAAAAGAAAAAATTGCCGAGCTTTTCCCATACAGTGAACCAGCAATACAATTAACTGATAATCAACAAACTGTTTAT
CAATTCATCAAACAGAATCCGCAGATTTCACTGGACGATCTTGCACAGGAAATTGACATCCCTTCGCATAAAATCTTACC
AATTATTTTAGAATTAGAACTTTTAGGGAAAGTAAAATCATTTTCCGGGAGACAATTTATCGCAAATTAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (307-363)

• DNA recombination-mediator protein A (DNA_processg_A) (74-279)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Riemerella anatipestifer ATCC 11845 = DSM 15868	52.198	98.645	0.515