Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   JNUCC51_RS13795 Genome accession   NZ_CP065545
Coordinates   2850632..2851582 (+) Length   316 a.a.
NCBI ID   WP_337988546.1    Uniprot ID   -
Organism   Lysinibacillus sp. JNUCC-51     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2845632..2856582
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JNUCC51_RS13775 (JNUCC51_13670) - 2845804..2846949 (+) 1146 WP_337988543.1 M20 peptidase aminoacylase family protein -
  JNUCC51_RS13780 (JNUCC51_13675) - 2846949..2847773 (+) 825 WP_337988544.1 GNAT family N-acetyltransferase -
  JNUCC51_RS13785 (JNUCC51_13680) menC 2847796..2848902 (+) 1107 WP_337988545.1 o-succinylbenzoate synthase -
  JNUCC51_RS13790 (JNUCC51_13685) - 2849198..2850250 (+) 1053 WP_134023784.1 hypothetical protein -
  JNUCC51_RS13795 (JNUCC51_13690) ceuB 2850632..2851582 (+) 951 WP_337988546.1 ABC transporter permease Machinery gene
  JNUCC51_RS13800 (JNUCC51_13695) - 2851575..2852528 (+) 954 WP_337988547.1 iron chelate uptake ABC transporter family permease subunit -
  JNUCC51_RS13805 (JNUCC51_13700) - 2852525..2853286 (+) 762 WP_337988548.1 ABC transporter ATP-binding protein -
  JNUCC51_RS13810 (JNUCC51_13705) - 2853350..2854360 (+) 1011 WP_337988549.1 siderophore ABC transporter substrate-binding protein -
  JNUCC51_RS13815 (JNUCC51_13710) - 2854362..2854676 (+) 315 WP_100544940.1 antibiotic biosynthesis monooxygenase -
  JNUCC51_RS13820 (JNUCC51_13715) - 2854933..2855565 (-) 633 WP_337988550.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34863.10 Da        Isoelectric Point: 10.0517

>NTDB_id=511844 JNUCC51_RS13795 WP_337988546.1 2850632..2851582(+) (ceuB) [Lysinibacillus sp. JNUCC-51]
MKKRYLLTVTVVLSIVSLFIGVVDIKPSDLLDFESEETRLFFISRIPRLVAILLAGAGMSIAGLIMQSLSRNKFVSPTTA
GTLDATKLGVLISMMFFTNVTYFQKISFAFLFALAGTLLFMQILNRIKFKDAIFIPLIGLMFGNILSSITTFFAYKADII
QNISAWLQGDFSLMMKGRYELLYISVPVLILAYIYANRFTVAGMGEDFAKNLGLSYKFVVNLGLVLVALISTTVVLTVGV
IPFLGLIIPNIISLFKGDNLSKTLPHTALLGMSFLLFCDIIGRVLIFPYEIPISMTVGVIGSAIFLIMLFRGKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=511844 JNUCC51_RS13795 WP_337988546.1 2850632..2851582(+) (ceuB) [Lysinibacillus sp. JNUCC-51]
ATGAAAAAAAGATATCTTTTAACAGTAACTGTAGTGCTGTCTATAGTTTCACTATTTATCGGAGTAGTTGATATAAAACC
GAGTGATCTATTAGACTTCGAATCAGAAGAGACTAGACTATTTTTTATTAGTCGTATACCGAGACTTGTAGCAATTTTGT
TAGCAGGTGCAGGTATGAGTATTGCTGGTTTAATTATGCAAAGCTTAAGTAGGAATAAGTTCGTGTCACCAACGACAGCA
GGTACATTAGATGCTACAAAGTTGGGGGTACTAATTTCGATGATGTTTTTCACAAATGTCACGTACTTTCAAAAAATTTC
CTTCGCTTTCCTATTTGCTTTAGCCGGCACATTATTGTTTATGCAAATATTAAATCGAATAAAATTTAAAGATGCGATCT
TTATACCGCTTATTGGCTTAATGTTTGGTAATATCCTTTCATCAATTACAACGTTCTTTGCGTATAAAGCAGATATTATC
CAAAACATTTCTGCATGGTTACAGGGAGATTTCTCATTAATGATGAAAGGTCGTTATGAGCTTTTATACATAAGTGTGCC
CGTGCTGATTTTAGCTTACATTTATGCGAACCGCTTCACAGTGGCAGGGATGGGTGAGGATTTTGCAAAAAACCTGGGTC
TTTCCTATAAATTCGTTGTGAATTTAGGTTTAGTGTTAGTAGCACTTATTTCGACGACGGTGGTGCTAACAGTTGGTGTG
ATACCGTTCCTTGGTTTAATCATTCCAAATATAATTTCGCTGTTCAAAGGGGATAACCTTTCTAAAACATTGCCACATAC
AGCATTACTAGGTATGTCGTTCTTATTATTCTGCGACATTATAGGGCGTGTACTTATTTTCCCTTATGAAATTCCGATTA
GTATGACTGTCGGTGTCATCGGAAGTGCGATCTTCCTAATTATGTTATTTAGGGGGAAAGCATATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

54.313

99.051

0.538