Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   I5367_RS05820 Genome accession   NZ_CP065539
Coordinates   1124849..1125505 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus amyloliquefaciens strain DGL1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1119849..1130505
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5367_RS05790 (I5367_05790) oppF 1120378..1121295 (+) 918 WP_012117283.1 oligopeptide ABC transporter ATP-binding protein OppF -
  I5367_RS05795 (I5367_05795) - 1121402..1122598 (+) 1197 WP_012117284.1 putative glycoside hydrolase -
  I5367_RS05800 (I5367_05800) - 1122707..1123285 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  I5367_RS05805 (I5367_05805) spx 1123464..1123859 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  I5367_RS05810 (I5367_05810) - 1123917..1124573 (-) 657 WP_012117285.1 TerC family protein -
  I5367_RS05820 (I5367_05820) mecA 1124849..1125505 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  I5367_RS05825 (I5367_05825) - 1125656..1126816 (+) 1161 WP_012117286.1 competence protein CoiA family protein -
  I5367_RS05830 (I5367_05830) pepF 1127044..1128873 (+) 1830 WP_007409107.1 oligoendopeptidase F Regulator
  I5367_RS05835 (I5367_05835) - 1128911..1129078 (-) 168 WP_003155026.1 hypothetical protein -
  I5367_RS05840 (I5367_05840) spxH 1129364..1130266 (-) 903 WP_012117287.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=511751 I5367_RS05820 WP_003155032.1 1124849..1125505(+) (mecA) [Bacillus amyloliquefaciens strain DGL1]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=511751 I5367_RS05820 WP_003155032.1 1124849..1125505(+) (mecA) [Bacillus amyloliquefaciens strain DGL1]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
GGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAGGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895