Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | SPAF_RS09730 | Genome accession | NC_017905 |
| Coordinates | 2029360..2031789 (-) | Length | 809 a.a. |
| NCBI ID | WP_013904284.1 | Uniprot ID | I1ZPE9 |
| Organism | Streptococcus parasanguinis FW213 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2024360..2036789
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPAF_RS09700 (Spaf_1978) | - | 2024649..2025425 (-) | 777 | WP_003015125.1 | NUDIX hydrolase | - |
| SPAF_RS09705 (Spaf_1979) | pnuC | 2025426..2026208 (-) | 783 | WP_003015123.1 | nicotinamide riboside transporter PnuC | - |
| SPAF_RS09710 (Spaf_1980) | - | 2026219..2027280 (-) | 1062 | WP_014714029.1 | AAA family ATPase | - |
| SPAF_RS09715 (Spaf_1981) | - | 2027445..2028158 (-) | 714 | WP_003015121.1 | hypothetical protein | - |
| SPAF_RS09720 (Spaf_1983) | - | 2028477..2028884 (-) | 408 | WP_014714031.1 | DUF4430 domain-containing protein | - |
| SPAF_RS09725 (Spaf_1984) | - | 2028862..2029350 (-) | 489 | WP_014714032.1 | hypothetical protein | - |
| SPAF_RS09730 (Spaf_1985) | clpC | 2029360..2031789 (-) | 2430 | WP_013904284.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| SPAF_RS09735 (Spaf_1986) | - | 2031790..2032254 (-) | 465 | WP_003002068.1 | CtsR family transcriptional regulator | - |
| SPAF_RS09740 (Spaf_1987) | - | 2032629..2036339 (-) | 3711 | WP_014714033.1 | alpha-L-fucosidase | - |
Sequence
Protein
Download Length: 809 a.a. Molecular weight: 89742.20 Da Isoelectric Point: 5.3454
>NTDB_id=51149 SPAF_RS09730 WP_013904284.1 2029360..2031789(-) (clpC) [Streptococcus parasanguinis FW213]
MNYSTALLESIEAAQILAGHYQGHTLDTWHLLTAMANNPYSVAGSVLNDYPMQIDEFQDAAEHITGQAFQSDNRYEIFPF
SYRMEAIMKHAREIAQVLHAKTLGTEHVLLSLLADRGTLASQVMEFAGFAFTEQDKGVPIASLRKNLEDKAGWDKNDIKA
IRSLYRAQNPNRQTMGNMMGMPPSTSGGLEDYTRDLTEMARAGQIEPVIGRDAEISRMIQILSRKTKNNPVLVGEAGVGK
TALALGLAQRVASGNVPAEIAQMRVLELDLMNVVAGTRFRGDFEERMNNIIQDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTIEEPSVADSIQILQGLKETYQDHHHVTITDEAIET
AVKYAHRYLTSRQLPDSAIDLLDEAAATVQNRDSNGHVKEELTALDRALMDGKWKKAAQLLEVEAAPIVYKKEVTDQDVL
VTLSQLSGIPTQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSE
DMQQVVKVMVKPLIATLAEQDMTLKFQPSALKLLATKGYDPEMGARPLRRVLQTEVEDQLAELLLKGQAQEGQTIKVGTT
AGTIKFEIV
MNYSTALLESIEAAQILAGHYQGHTLDTWHLLTAMANNPYSVAGSVLNDYPMQIDEFQDAAEHITGQAFQSDNRYEIFPF
SYRMEAIMKHAREIAQVLHAKTLGTEHVLLSLLADRGTLASQVMEFAGFAFTEQDKGVPIASLRKNLEDKAGWDKNDIKA
IRSLYRAQNPNRQTMGNMMGMPPSTSGGLEDYTRDLTEMARAGQIEPVIGRDAEISRMIQILSRKTKNNPVLVGEAGVGK
TALALGLAQRVASGNVPAEIAQMRVLELDLMNVVAGTRFRGDFEERMNNIIQDIEEDGHVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQDEYQKHIEKDAALSRRFAKVTIEEPSVADSIQILQGLKETYQDHHHVTITDEAIET
AVKYAHRYLTSRQLPDSAIDLLDEAAATVQNRDSNGHVKEELTALDRALMDGKWKKAAQLLEVEAAPIVYKKEVTDQDVL
VTLSQLSGIPTQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSNKRPIGSFMFLGPTGVGKTELAKA
LAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDG
VLTDSKGRKIDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQANMEKRMFEELKKTYRPEFINRIDEKVVFHSLSSE
DMQQVVKVMVKPLIATLAEQDMTLKFQPSALKLLATKGYDPEMGARPLRRVLQTEVEDQLAELLLKGQAQEGQTIKVGTT
AGTIKFEIV
Nucleotide
Download Length: 2430 bp
>NTDB_id=51149 SPAF_RS09730 WP_013904284.1 2029360..2031789(-) (clpC) [Streptococcus parasanguinis FW213]
ATGAACTATTCAACAGCACTGTTAGAAAGTATAGAAGCGGCCCAAATACTAGCAGGCCACTATCAGGGGCATACCTTAGA
TACTTGGCATCTCCTGACGGCTATGGCCAATAATCCCTATAGCGTGGCAGGTTCTGTACTGAACGATTATCCTATGCAGA
TCGATGAGTTTCAGGATGCAGCGGAGCATATTACAGGTCAAGCTTTTCAAAGCGACAATCGGTATGAAATCTTCCCATTT
TCTTATCGGATGGAAGCGATTATGAAGCACGCAAGAGAGATTGCCCAGGTTCTTCATGCCAAGACCTTGGGAACAGAGCA
TGTGCTCCTCTCTCTTCTAGCAGACCGTGGGACCTTGGCTAGCCAAGTCATGGAGTTTGCCGGCTTTGCCTTTACAGAGC
AAGACAAGGGAGTTCCTATTGCCTCCCTTCGCAAGAATTTAGAAGACAAGGCAGGCTGGGACAAGAATGATATCAAAGCC
ATTCGGAGTCTTTATCGGGCTCAAAACCCTAACCGCCAAACCATGGGAAATATGATGGGCATGCCCCCAAGCACCAGTGG
AGGTCTTGAAGATTATACCCGTGATTTGACAGAAATGGCGCGGGCAGGCCAGATTGAGCCTGTGATCGGCCGGGATGCAG
AGATTTCACGCATGATCCAAATCCTCAGCCGCAAGACGAAGAACAATCCTGTATTGGTGGGAGAAGCAGGGGTCGGGAAA
ACCGCCCTTGCATTAGGTCTGGCCCAGCGTGTCGCTAGTGGCAATGTTCCAGCTGAAATCGCACAAATGCGTGTCCTGGA
ATTGGATCTCATGAATGTCGTTGCAGGGACGCGCTTCCGTGGAGACTTCGAAGAACGGATGAACAATATCATCCAGGACA
TCGAAGAAGACGGTCACGTGATTCTCTTTATCGATGAACTGCATACCATTATGGGGTCAGGATCCGGCATTGATTCGACC
TTAGACGCAGCCAATATTCTAAAACCAGCCTTGGCACGAGGAACCTTGCGTACAGTTGGAGCAACGACCCAAGATGAGTA
CCAAAAGCATATCGAAAAAGATGCAGCCCTCTCTCGGCGTTTTGCGAAAGTCACCATTGAAGAGCCAAGTGTTGCAGATA
GCATCCAAATTCTCCAAGGCTTGAAAGAGACCTATCAGGACCACCATCATGTGACCATTACTGATGAAGCGATCGAGACA
GCTGTCAAATATGCCCACCGCTATTTGACCAGCCGTCAATTGCCAGATTCAGCCATTGATCTCTTGGATGAAGCGGCAGC
TACCGTACAAAACCGCGATTCCAATGGTCACGTAAAAGAAGAGTTGACCGCTTTGGATCGGGCTTTGATGGATGGCAAGT
GGAAGAAAGCAGCCCAGCTCTTAGAAGTAGAGGCCGCTCCCATTGTCTACAAAAAAGAAGTCACTGACCAAGATGTCTTG
GTGACCTTGAGCCAATTATCTGGTATTCCAACTCAAAAACTGACCCAAACCGATGCCAAGAAGTACCTAAACTTAGAAGC
AGAATTGCATAAGCGCGTGATTGGTCAAGACCAAGCCGTTTCGAGTATCAGTCGGGCCATTCGACGCAATCAATCGGGGA
TCCGTAGCAATAAACGTCCGATCGGTTCTTTCATGTTCCTAGGACCTACCGGTGTCGGAAAAACAGAATTAGCCAAAGCT
TTGGCAGAAGTTCTGTTTGATGATGAATCGGCCCTCATCCGTTTTGATATGAGTGAGTACATGGAAAAATTTGCGGCTAG
CCGCCTCAACGGTGCCCCTCCAGGCTATGTGGGCTACGAAGAAGGAGGCGAATTGACCGAGAAAGTTCGCAACAAACCAT
ATTCAGTTCTCTTATTTGATGAGGTGGAAAAAGCCCACCCAGATATTTTTAATGTCCTTTTGCAAGTCTTGGATGACGGA
GTCTTAACCGATAGCAAAGGCCGGAAGATTGATTTCTCCAATACCATTATCATCATGACCTCAAATCTGGGAGCAACAGC
CCTTCGGGATGATAAGACAGTTGGCTTTGGTGCCAAAGATATTCGCTTTGATCAGGCCAATATGGAAAAACGCATGTTTG
AAGAGTTGAAGAAGACCTATCGTCCAGAGTTTATCAACCGGATTGATGAAAAGGTGGTCTTCCATAGTCTCTCAAGCGAG
GACATGCAGCAGGTGGTGAAAGTCATGGTCAAACCGCTCATCGCGACCTTGGCCGAACAAGACATGACTCTCAAATTCCA
GCCTTCAGCGCTCAAGTTGCTAGCAACCAAAGGCTACGATCCAGAAATGGGAGCTCGCCCACTGCGTCGTGTCTTGCAGA
CCGAAGTGGAAGATCAGTTAGCAGAGCTATTGCTGAAAGGGCAAGCCCAAGAAGGTCAAACCATCAAGGTTGGAACGACA
GCCGGAACGATCAAGTTCGAGATTGTCTAG
ATGAACTATTCAACAGCACTGTTAGAAAGTATAGAAGCGGCCCAAATACTAGCAGGCCACTATCAGGGGCATACCTTAGA
TACTTGGCATCTCCTGACGGCTATGGCCAATAATCCCTATAGCGTGGCAGGTTCTGTACTGAACGATTATCCTATGCAGA
TCGATGAGTTTCAGGATGCAGCGGAGCATATTACAGGTCAAGCTTTTCAAAGCGACAATCGGTATGAAATCTTCCCATTT
TCTTATCGGATGGAAGCGATTATGAAGCACGCAAGAGAGATTGCCCAGGTTCTTCATGCCAAGACCTTGGGAACAGAGCA
TGTGCTCCTCTCTCTTCTAGCAGACCGTGGGACCTTGGCTAGCCAAGTCATGGAGTTTGCCGGCTTTGCCTTTACAGAGC
AAGACAAGGGAGTTCCTATTGCCTCCCTTCGCAAGAATTTAGAAGACAAGGCAGGCTGGGACAAGAATGATATCAAAGCC
ATTCGGAGTCTTTATCGGGCTCAAAACCCTAACCGCCAAACCATGGGAAATATGATGGGCATGCCCCCAAGCACCAGTGG
AGGTCTTGAAGATTATACCCGTGATTTGACAGAAATGGCGCGGGCAGGCCAGATTGAGCCTGTGATCGGCCGGGATGCAG
AGATTTCACGCATGATCCAAATCCTCAGCCGCAAGACGAAGAACAATCCTGTATTGGTGGGAGAAGCAGGGGTCGGGAAA
ACCGCCCTTGCATTAGGTCTGGCCCAGCGTGTCGCTAGTGGCAATGTTCCAGCTGAAATCGCACAAATGCGTGTCCTGGA
ATTGGATCTCATGAATGTCGTTGCAGGGACGCGCTTCCGTGGAGACTTCGAAGAACGGATGAACAATATCATCCAGGACA
TCGAAGAAGACGGTCACGTGATTCTCTTTATCGATGAACTGCATACCATTATGGGGTCAGGATCCGGCATTGATTCGACC
TTAGACGCAGCCAATATTCTAAAACCAGCCTTGGCACGAGGAACCTTGCGTACAGTTGGAGCAACGACCCAAGATGAGTA
CCAAAAGCATATCGAAAAAGATGCAGCCCTCTCTCGGCGTTTTGCGAAAGTCACCATTGAAGAGCCAAGTGTTGCAGATA
GCATCCAAATTCTCCAAGGCTTGAAAGAGACCTATCAGGACCACCATCATGTGACCATTACTGATGAAGCGATCGAGACA
GCTGTCAAATATGCCCACCGCTATTTGACCAGCCGTCAATTGCCAGATTCAGCCATTGATCTCTTGGATGAAGCGGCAGC
TACCGTACAAAACCGCGATTCCAATGGTCACGTAAAAGAAGAGTTGACCGCTTTGGATCGGGCTTTGATGGATGGCAAGT
GGAAGAAAGCAGCCCAGCTCTTAGAAGTAGAGGCCGCTCCCATTGTCTACAAAAAAGAAGTCACTGACCAAGATGTCTTG
GTGACCTTGAGCCAATTATCTGGTATTCCAACTCAAAAACTGACCCAAACCGATGCCAAGAAGTACCTAAACTTAGAAGC
AGAATTGCATAAGCGCGTGATTGGTCAAGACCAAGCCGTTTCGAGTATCAGTCGGGCCATTCGACGCAATCAATCGGGGA
TCCGTAGCAATAAACGTCCGATCGGTTCTTTCATGTTCCTAGGACCTACCGGTGTCGGAAAAACAGAATTAGCCAAAGCT
TTGGCAGAAGTTCTGTTTGATGATGAATCGGCCCTCATCCGTTTTGATATGAGTGAGTACATGGAAAAATTTGCGGCTAG
CCGCCTCAACGGTGCCCCTCCAGGCTATGTGGGCTACGAAGAAGGAGGCGAATTGACCGAGAAAGTTCGCAACAAACCAT
ATTCAGTTCTCTTATTTGATGAGGTGGAAAAAGCCCACCCAGATATTTTTAATGTCCTTTTGCAAGTCTTGGATGACGGA
GTCTTAACCGATAGCAAAGGCCGGAAGATTGATTTCTCCAATACCATTATCATCATGACCTCAAATCTGGGAGCAACAGC
CCTTCGGGATGATAAGACAGTTGGCTTTGGTGCCAAAGATATTCGCTTTGATCAGGCCAATATGGAAAAACGCATGTTTG
AAGAGTTGAAGAAGACCTATCGTCCAGAGTTTATCAACCGGATTGATGAAAAGGTGGTCTTCCATAGTCTCTCAAGCGAG
GACATGCAGCAGGTGGTGAAAGTCATGGTCAAACCGCTCATCGCGACCTTGGCCGAACAAGACATGACTCTCAAATTCCA
GCCTTCAGCGCTCAAGTTGCTAGCAACCAAAGGCTACGATCCAGAAATGGGAGCTCGCCCACTGCGTCGTGTCTTGCAGA
CCGAAGTGGAAGATCAGTTAGCAGAGCTATTGCTGAAAGGGCAAGCCCAAGAAGGTCAAACCATCAAGGTTGGAACGACA
GCCGGAACGATCAAGTTCGAGATTGTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae TIGR4 |
76.695 |
100 |
0.769 |
| clpC | Streptococcus pneumoniae Rx1 |
76.695 |
100 |
0.769 |
| clpC | Streptococcus pneumoniae D39 |
76.695 |
100 |
0.769 |
| clpC | Streptococcus mutans UA159 |
65.973 |
100 |
0.666 |
| clpC | Streptococcus thermophilus LMG 18311 |
64.496 |
100 |
0.649 |
| clpC | Streptococcus thermophilus LMD-9 |
64.496 |
100 |
0.649 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.601 |
100 |
0.52 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.238 |
98.64 |
0.446 |
| clpE | Streptococcus mutans UA159 |
47.847 |
77.503 |
0.371 |
| clpE | Streptococcus pneumoniae Rx1 |
45.917 |
80.222 |
0.368 |
| clpE | Streptococcus pneumoniae D39 |
45.917 |
80.222 |
0.368 |
| clpE | Streptococcus pneumoniae R6 |
45.917 |
80.222 |
0.368 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.917 |
80.222 |
0.368 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
45.938 |
79.11 |
0.363 |