Detailed information NTG0051148

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: SPAF_RS09555
• Genome accession: NC_017905
• Coordinates: 1984576..1985940 (-)
• Length: 454 a.a.
• NCBI ID: WP_071788421.1
• Uniprot ID: -
• Organism: Streptococcus parasanguinis FW213
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1979576..1990940

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPAF_RS09550 (Spaf_1944)	-	1983979..1984476 (-)	498	WP_041826484.1	carbonic anhydrase	-
SPAF_RS09555 (Spaf_1945)	radA	1984576..1985940 (-)	1365	WP_071788421.1	DNA repair protein RadA	Machinery gene
SPAF_RS09560 (Spaf_1946)	-	1985951..1986508 (-)	558	WP_041826485.1	histidine phosphatase family protein	-
SPAF_RS09565 (Spaf_1947)	-	1986468..1986914 (-)	447	WP_009731797.1	dUTP diphosphatase	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 49367.88 Da
• Isoelectric Point: 6.9518

>NTDB_id=51148 SPAF_RS09555 WP_071788421.1 1984576..1985940(-) (radA) [Streptococcus parasanguinis FW213]
MIAKKKTTFICQNCAYNSPKYLGRCPNCGSWSSFVEEVEVAEVKNARVSLTGEKTKPMKLADVTSINVHRTKTEMEEFNR
VLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEESAQQIKLRAERLGDIDSEFYLYAETNMQSVRAEV
ERIQPNFLIIDSIQTIMSPEISGVQGSVSQVREVTAELMQLAKTNNIAIFIVGHVTKEGTLAGPRMLEHMVDTVLYFEGE
RHHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSSIVVTMEGTRPILAEVQALVTPTMFGNA
KRTTTGLDFNRASLIMAVLEKRAGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKDKPTNPQECFVGELGLTGEV
RRVNRIEQRINEAAKLGFTKIYVPKNSLTGLTPPAGIQVIGVTTIGEVLKKVFG

Nucleotide

• Length: 1365 bp

>NTDB_id=51148 SPAF_RS09555 WP_071788421.1 1984576..1985940(-) (radA) [Streptococcus parasanguinis FW213]
ATCATCGCTAAGAAAAAAACGACATTTATTTGTCAAAATTGTGCCTATAATTCACCCAAATACCTAGGGCGCTGTCCTAA
CTGTGGTTCTTGGTCTTCTTTTGTCGAGGAGGTCGAGGTCGCAGAGGTCAAGAATGCCCGGGTGTCCTTGACGGGTGAAA
AGACCAAACCCATGAAATTGGCGGACGTGACCTCTATCAATGTCCATCGTACTAAGACCGAGATGGAGGAATTCAACCGC
GTCCTTGGAGGCGGTGTCGTCCCAGGAAGTCTGGTCCTGATTGGTGGTGATCCAGGGATTGGGAAATCGACCCTGCTCCT
TCAAGTGTCAACCCAGCTGTCTCAAGTAGGAACGGTTCTCTACGTCAGTGGAGAGGAATCGGCTCAGCAGATCAAACTCC
GAGCAGAGCGCTTGGGAGATATCGACAGTGAGTTTTACCTCTATGCAGAGACCAATATGCAGAGCGTGCGAGCAGAAGTG
GAGCGCATCCAGCCTAACTTCCTCATCATCGACTCTATCCAGACCATCATGTCTCCTGAAATTTCAGGGGTGCAGGGGTC
AGTCTCTCAGGTGCGAGAGGTAACGGCTGAGCTCATGCAACTGGCCAAGACCAATAACATCGCCATCTTTATCGTCGGTC
ATGTGACCAAGGAAGGAACCTTGGCAGGTCCTCGGATGCTGGAGCATATGGTGGATACGGTGCTCTACTTTGAAGGCGAA
CGCCACCACACCTTCCGAATCCTGAGAGCCGTCAAAAACCGCTTTGGCTCCACCAATGAGATCGGAATCTTTGAGATGCA
ATCAGGTGGCCTGGTCGAGGTCCTCAATCCTAGTCAGGTCTTTCTAGAAGAGCGTTTAGATGGCGCGACTGGATCCTCTA
TCGTAGTTACTATGGAGGGAACACGTCCGATTCTAGCCGAAGTGCAGGCCTTGGTGACGCCAACCATGTTTGGAAATGCC
AAGCGGACGACAACTGGGCTTGATTTTAATCGGGCCAGTCTCATCATGGCGGTGTTAGAAAAACGCGCAGGCCTCTTGCT
CCAAAATCAGGATGCCTATCTTAAGTCTGCAGGTGGCGTCAAATTGGATGAGCCAGCTATCGACCTAGCCGTGGCCGTAG
CCATTGCCTCCAGCTACAAGGATAAGCCGACCAACCCGCAAGAGTGTTTTGTCGGAGAGTTGGGCTTGACTGGAGAAGTC
CGTCGGGTTAATCGGATCGAGCAACGGATCAATGAAGCTGCTAAACTTGGTTTTACCAAGATTTATGTTCCTAAAAATTC
TCTGACGGGGCTCACCCCGCCAGCTGGGATTCAGGTAATTGGAGTGACGACCATTGGTGAAGTCTTGAAGAAGGTTTTTG
GCTAG

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (66-219)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (9-36)

• Subunit ChlI of Mg-chelatase (ChlI) (361-426)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus mitis SK321	97.13	99.78	0.969
radA	Streptococcus mitis NCTC 12261	96.909	99.78	0.967
radA	Streptococcus pneumoniae Rx1	96.909	99.78	0.967
radA	Streptococcus pneumoniae D39	96.909	99.78	0.967
radA	Streptococcus pneumoniae R6	96.909	99.78	0.967
radA	Streptococcus pneumoniae TIGR4	96.909	99.78	0.967
radA	Bacillus subtilis subsp. subtilis str. 168	62.801	100	0.632