Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   IQ781_RS23150 Genome accession   NZ_CP065509
Coordinates   4521283..4521741 (-) Length   152 a.a.
NCBI ID   WP_000804864.1    Uniprot ID   -
Organism   Bacillus sp. N447-1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 4516283..4526741
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IQ781_RS23125 (IQ781_23065) - 4516433..4517974 (-) 1542 WP_000449910.1 MDR family MFS transporter -
  IQ781_RS23130 (IQ781_23070) - 4518386..4518892 (+) 507 WP_079004393.1 hypothetical protein -
  IQ781_RS23135 (IQ781_23075) - 4518924..4519157 (-) 234 WP_000939448.1 SPP1 phage holin family protein -
  IQ781_RS23140 (IQ781_23080) - 4519321..4519974 (+) 654 WP_139846723.1 diguanylate cyclase -
  IQ781_RS23145 (IQ781_23085) - 4520589..4521251 (+) 663 WP_000922498.1 YkyA family protein -
  IQ781_RS23150 (IQ781_23090) kre 4521283..4521741 (-) 459 WP_000804864.1 YkyB family protein Regulator
  IQ781_RS23155 (IQ781_23095) - 4521881..4523455 (+) 1575 WP_002198132.1 Ppx/GppA family phosphatase -
  IQ781_RS23160 (IQ781_23100) - 4523565..4525673 (+) 2109 WP_000421678.1 polyphosphate kinase -
  IQ781_RS23165 (IQ781_23105) - 4525835..4526071 (-) 237 WP_000283738.1 hypothetical protein -

Sequence

Protein


Download         Length: 152 a.a.        Molecular weight: 17757.49 Da        Isoelectric Point: 10.6793

>NTDB_id=511455 IQ781_RS23150 WP_000804864.1 4521283..4521741(-) (kre) [Bacillus sp. N447-1]
MKPSQPQSQLQNQHSINRLAQSIFVVNRHAKAATNPKYLYWLKKTALERLIAEKKAIKEGLHFSRNPRFSQQQSDVLIRL
GDYFFHIPPTKEDFRILPHLGHLESSYRNPKTTLSLTVAKKTLQDYIGPEALKQEKKLSEPVPWYSRTYTKK

Nucleotide


Download         Length: 459 bp        

>NTDB_id=511455 IQ781_RS23150 WP_000804864.1 4521283..4521741(-) (kre) [Bacillus sp. N447-1]
ATGAAACCTTCACAACCACAATCTCAATTACAAAACCAACATTCTATTAATCGACTAGCTCAATCTATTTTCGTTGTGAA
TCGTCATGCTAAAGCAGCTACTAATCCTAAATATTTATACTGGTTAAAAAAGACAGCTTTAGAACGTTTGATTGCTGAAA
AAAAAGCAATTAAAGAAGGATTGCATTTTTCTAGAAACCCACGTTTTAGCCAACAACAATCTGATGTCCTTATACGTTTA
GGCGATTATTTTTTCCACATCCCTCCTACGAAAGAAGATTTTCGAATTCTACCGCATCTTGGTCATCTTGAATCCTCCTA
TCGAAATCCGAAAACAACCTTATCTTTAACAGTAGCAAAAAAAACACTTCAAGATTATATTGGTCCTGAAGCATTAAAAC
AAGAAAAAAAATTAAGTGAGCCTGTTCCATGGTATAGTCGTACTTATACAAAAAAATAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

64.655

76.316

0.493