Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   STCNRZ1202_RS05275 Genome accession   NZ_CP065506
Coordinates   994991..995803 (-) Length   270 a.a.
NCBI ID   WP_011681204.1    Uniprot ID   A0AAP2RND8
Organism   Streptococcus thermophilus strain CNRZ1202     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 989991..1000803
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ1202_RS05250 (STCNRZ1202_05285) - 990928..991314 (-) 387 WP_002953113.1 DUF1934 domain-containing protein -
  STCNRZ1202_RS05255 (STCNRZ1202_05290) - 991372..992285 (-) 914 Protein_978 GNAT family N-acetyltransferase -
  STCNRZ1202_RS05260 (STCNRZ1202_05295) yidA 992493..993302 (+) 810 WP_011226081.1 sugar-phosphatase -
  STCNRZ1202_RS05265 (STCNRZ1202_05300) - 993304..994518 (+) 1215 WP_004197368.1 aminoacyltransferase -
  STCNRZ1202_RS05270 (STCNRZ1202_05305) - 994570..994931 (-) 362 Protein_981 YbaN family protein -
  STCNRZ1202_RS05275 (STCNRZ1202_05310) vicX 994991..995803 (-) 813 WP_011681204.1 MBL fold metallo-hydrolase Regulator
  STCNRZ1202_RS05280 (STCNRZ1202_05315) vicK 995809..997149 (-) 1341 WP_011227273.1 cell wall metabolism sensor histidine kinase VicK Regulator
  STCNRZ1202_RS05285 (STCNRZ1202_05320) vicR 997142..997849 (-) 708 WP_011227274.1 response regulator YycF Regulator
  STCNRZ1202_RS05290 (STCNRZ1202_05325) - 998381..999148 (+) 768 WP_011226085.1 amino acid ABC transporter ATP-binding protein -
  STCNRZ1202_RS05295 (STCNRZ1202_05330) - 999160..999993 (+) 834 WP_347229540.1 transporter substrate-binding domain-containing protein -
  STCNRZ1202_RS05300 (STCNRZ1202_05335) - 1000011..1000709 (+) 699 WP_065973256.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30045.01 Da        Isoelectric Point: 5.5779

>NTDB_id=511379 STCNRZ1202_RS05275 WP_011681204.1 994991..995803(-) (vicX) [Streptococcus thermophilus strain CNRZ1202]
MTSELGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKVDNSQKHIFSRGKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GLIENADGYLIESNHDIEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAYMTME
NQLARADFGVGTDFKIFGTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=511379 STCNRZ1202_RS05275 WP_011681204.1 994991..995803(-) (vicX) [Streptococcus thermophilus strain CNRZ1202]
ATGACCTCAGAATTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACCGGGAATTCCTTTTATTTGGAAACTCCAGA
AAAGAAGATTCTAGTGGATGCTGGTTTATCAGGAAAAAAAATTACAAGTTTGCTAGCGGAGATTGACCGTGATCCAAGTG
ATCTTGATGCTATCTTAGTAACACATGAACACAAGGACCATATCCATGGTGTAGGTGTTTTAGCTCGTAAATACGGCATG
GATATATACGCCAATGAGAAAACCTGGCAAATTATGGATAGTAAGAATATGCTAGGTAAGGTTGATAATAGTCAGAAACA
TATTTTTTCTCGCGGTAAGCTTCTAACCTTTGGTGATATCGACATTGAATCTTTCGGAGTTAGTCATGATGCCATTGATC
CACAATTTTACCGCTTTATGAAAGACGGAAAGAGCTTTGTCATGTTGACGGATACAGGCTATGTTTCAGACCGTATGGCT
GGTCTTATTGAAAATGCTGATGGCTATCTGATTGAATCTAATCATGATATTGAAATCTTGAGAGCAGGTTCTTATCCTTG
GTCAACCAAGCAACGTATCCTCTCTGATCAGGGTCACTTGTGTAATGAGGATGGAGCCGATGCTATGATTCGTACCATCG
GTAATAAAACTAAAAAGATTTATCTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAATTGGCCTACATGACGATGGAA
AATCAGTTGGCTCGCGCTGACTTTGGTGTTGGAACTGACTTTAAGATTTTTGGTACCTCACCAGATACGGCGACCCCACT
AACAGATATTTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.985

99.259

0.774