Detailed information NTG0511260

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: STT55_RS05620
• Genome accession: NZ_CP065502
• Coordinates: 1067258..1068139 (-)
• Length: 293 a.a.
• NCBI ID: WP_022096754.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain ST55
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1062258..1073139

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STT55_RS05595 (STT55_05550)	vicR	1062962..1063669 (-)	708	WP_173940375.1	response regulator YycF	Regulator
STT55_RS05600 (STT55_05555)	-	1064196..1064963 (+)	768	WP_173940376.1	amino acid ABC transporter ATP-binding protein	-
STT55_RS05605 (STT55_05560)	-	1064975..1065808 (+)	834	WP_022096756.1	transporter substrate-binding domain-containing protein	-
STT55_RS05610 (STT55_05565)	-	1065826..1066524 (+)	699	WP_022096755.1	amino acid ABC transporter permease	-
STT55_RS05615 (STT55_05570)	-	1066536..1067186 (+)	651	WP_011226088.1	amino acid ABC transporter permease	-
STT55_RS05620 (STT55_05575)	endA	1067258..1068139 (-)	882	WP_022096754.1	DNA/RNA non-specific endonuclease	Machinery gene
STT55_RS05625 (STT55_05580)	-	1068201..1068389 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
STT55_RS05630 (STT55_05585)	murA	1068391..1069662 (-)	1272	WP_096811493.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
STT55_RS05635 (STT55_05590)	-	1069732..1069968 (-)	237	WP_002946959.1	DUF1146 family protein	-
STT55_RS05640 (STT55_05595)	galE	1070156..1071169 (-)	1014	WP_002946961.1	UDP-glucose 4-epimerase GalE	-
STT55_RS05645 (STT55_05600)	-	1071129..1071800 (-)	672	WP_338121103.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31813.61 Da
• Isoelectric Point: 10.1789

>NTDB_id=511260 STT55_RS05620 WP_022096754.1 1067258..1068139(-) (endA) [Streptococcus thermophilus strain ST55]
MAKRKTSLTNKQKRQLVTLIIAVLIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSINSQSTPQEQLAETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=511260 STT55_RS05620 WP_022096754.1 1067258..1068139(-) (endA) [Streptococcus thermophilus strain ST55]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGTTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAATAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	70.635	86.007	0.608
endA	Streptococcus pneumoniae D39	70.635	86.007	0.608
endA	Streptococcus pneumoniae R6	70.635	86.007	0.608
endA	Streptococcus pneumoniae TIGR4	70.635	86.007	0.608