Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ST4145_RS07645 Genome accession   NZ_CP065492
Coordinates   1486918..1487994 (-) Length   358 a.a.
NCBI ID   WP_024010058.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain 4145     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1481918..1492994
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ST4145_RS07625 (ST4145_07555) - 1483030..1485096 (-) 2067 WP_011681548.1 sodium:proton antiporter -
  ST4145_RS07630 (ST4145_07560) - 1485105..1485347 (-) 243 WP_011226461.1 hypothetical protein -
  ST4145_RS07635 (ST4145_07565) - 1485344..1485892 (-) 549 WP_011226462.1 class I SAM-dependent methyltransferase -
  ST4145_RS07640 (ST4145_07570) - 1485889..1486833 (-) 945 WP_024010057.1 TIGR01212 family radical SAM protein -
  ST4145_RS07645 (ST4145_07575) sepM 1486918..1487994 (-) 1077 WP_024010058.1 SepM family pheromone-processing serine protease Regulator
  ST4145_RS07650 (ST4145_07580) coaD 1487972..1488469 (-) 498 WP_002951739.1 pantetheine-phosphate adenylyltransferase -
  ST4145_RS07655 (ST4145_07585) rsmD 1488503..1489102 (-) 600 Protein_1454 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ST4145_RS07660 (ST4145_07590) trxB 1489193..1490146 (-) 954 WP_255136104.1 thioredoxin-disulfide reductase -
  ST4145_RS07665 (ST4145_07595) - 1490179..1490403 (-) 225 WP_014621911.1 DUF4059 family protein -
  ST4145_RS07670 (ST4145_07600) - 1490618..1491361 (-) 744 WP_024010059.1 amino acid ABC transporter ATP-binding protein -
  ST4145_RS07675 (ST4145_07605) - 1491361..1492107 (-) 747 WP_095559509.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39218.09 Da        Isoelectric Point: 9.3888

>NTDB_id=510916 ST4145_RS07645 WP_024010058.1 1486918..1487994(-) (sepM) [Streptococcus thermophilus strain 4145]
MANKIKSKALLEKMWRIKWWLLSIFTVFFLLFALFFPLNNYYVELPGGAFDTKEVLTVNKKADDSKGSYNFVAVAQTKAT
LALMLYAQFNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAVYQGLTLAGKEVSLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGNTFDNSTDMIKYVQGLKLGSKVKVTYMRDGKEKTATGKIIKIANGKNGIGIGLTDHTEIKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNLVTKEMKKADPD
AKTNYQEAKEAAEKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=510916 ST4145_RS07645 WP_024010058.1 1486918..1487994(-) (sepM) [Streptococcus thermophilus strain 4145]
GTGGCAAACAAGATAAAATCTAAAGCGCTATTAGAGAAAATGTGGCGTATTAAGTGGTGGTTATTAAGTATTTTTACGGT
ATTTTTCCTCCTTTTTGCCCTCTTTTTCCCGCTCAATAATTACTATGTGGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACAGTGAATAAGAAAGCTGATGATTCTAAGGGCTCCTATAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCTCAGTTTAATGATTTTGCAAAGCTTCAAACGGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGCATCAACCAATTTTACATGGAGACTTCTCAAAACCAAGCGGTTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGTTAGTTTGGAGTATATGGGTGTCTATGTGCTTCAGGTTGCTGATGATTCTAGCTTCAAGGGTGTCCTCAAT
ATTGCTGATACGGTGACGGCTGTTAATGGTAATACCTTTGATAATTCTACTGACATGATTAAATACGTTCAAGGACTTAA
GCTGGGTTCAAAGGTCAAGGTCACTTATATGAGAGATGGCAAAGAAAAGACTGCTACTGGTAAGATTATTAAGATTGCCA
ATGGCAAAAATGGTATTGGTATCGGCCTAACGGACCATACTGAGATCAAGAGTCCTGAGAATGTTAAGTTTAAACTGGAT
GGTGTCGGTGGGCCAAGTGCTGGTCTTATGTTTACCTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGCAAGATTGCTGGTACAGGAACTATTGAAAAAGATGGGGCTGTCGGTGATATCGGTGGGGCCTATCTCAAGGTGAAAT
CTGCGGCTGATAGTGGCGCAGACATTTTCTTCGTGCCAAATAATCTAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAATTATCAAGAGGCCAAGGAAGCTGCCGAGAAACTGGGGACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATGA

Domains


Predicted by InterproScan.

(137-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

62.757

95.251

0.598