Detailed information NTG0510791

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: STCNRZ1575_RS06900
• Genome accession: NZ_CP065490
• Coordinates: 1317432..1318358 (-)
• Length: 308 a.a.
• NCBI ID: WP_084828982.1
• Uniprot ID: A0A0E2Q2N6
• Organism: Streptococcus thermophilus strain CNRZ1575
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1312432..1323358

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STCNRZ1575_RS06870 (STCNRZ1575_06855)	-	1312510..1313304 (-)	795	WP_011681412.1	HAD family hydrolase	-
STCNRZ1575_RS06875 (STCNRZ1575_06860)	-	1313488..1313865 (+)	378	WP_011681413.1	GntR family transcriptional regulator	-
STCNRZ1575_RS06880 (STCNRZ1575_06865)	-	1313870..1314568 (+)	699	WP_011226301.1	ABC transporter ATP-binding protein	-
STCNRZ1575_RS06885 (STCNRZ1575_06870)	-	1314580..1315365 (+)	786	WP_011681414.1	hypothetical protein	-
STCNRZ1575_RS06890 (STCNRZ1575_06875)	amiF	1315415..1316344 (-)	930	WP_082245810.1	ATP-binding cassette domain-containing protein	Regulator
STCNRZ1575_RS06895 (STCNRZ1575_06880)	amiE	1316337..1317422 (-)	1086	WP_084828981.1	ABC transporter ATP-binding protein	Regulator
STCNRZ1575_RS06900 (STCNRZ1575_06885)	amiD	1317432..1318358 (-)	927	WP_084828982.1	oligopeptide ABC transporter permease OppC	Regulator
STCNRZ1575_RS06905 (STCNRZ1575_06890)	amiC	1318358..1319851 (-)	1494	WP_180483348.1	ABC transporter permease	Regulator
STCNRZ1575_RS06910 (STCNRZ1575_06895)	amiA	1319913..1321880 (-)	1968	WP_347129999.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34664.83 Da
• Isoelectric Point: 9.7054

>NTDB_id=510791 STCNRZ1575_RS06900 WP_084828982.1 1317432..1318358(-) (amiD) [Streptococcus thermophilus strain CNRZ1575]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIIGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=510791 STCNRZ1575_RS06900 WP_084828982.1 1317432..1318358(-) (amiD) [Streptococcus thermophilus strain CNRZ1575]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTGCTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTTTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATTATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGACTATGC
ACAGAATGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCTCTCTTTATTA
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

3D structure

• AlphaFold DB: A0A0E2Q2N6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	99.026	100	0.99
amiD	Streptococcus thermophilus LMD-9	99.026	100	0.99
amiD	Streptococcus salivarius strain HSISS4	96.104	100	0.961