Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   STCNRZ302_RS07865 Genome accession   NZ_CP065489
Coordinates   1522215..1523291 (-) Length   358 a.a.
NCBI ID   WP_011681549.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ302     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1517215..1528291
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ302_RS07845 (STCNRZ302_07760) - 1518327..1520393 (-) 2067 WP_179970583.1 sodium:proton antiporter -
  STCNRZ302_RS07850 (STCNRZ302_07765) - 1520402..1520644 (-) 243 WP_011226461.1 hypothetical protein -
  STCNRZ302_RS07855 (STCNRZ302_07770) - 1520641..1521189 (-) 549 WP_011226462.1 class I SAM-dependent methyltransferase -
  STCNRZ302_RS07860 (STCNRZ302_07775) - 1521186..1522130 (-) 945 WP_011226463.1 TIGR01212 family radical SAM protein -
  STCNRZ302_RS07865 (STCNRZ302_07780) sepM 1522215..1523291 (-) 1077 WP_011681549.1 SepM family pheromone-processing serine protease Regulator
  STCNRZ302_RS07870 (STCNRZ302_07785) coaD 1523269..1523766 (-) 498 WP_011681550.1 pantetheine-phosphate adenylyltransferase -
  STCNRZ302_RS07875 (STCNRZ302_07790) rsmD 1523800..1524399 (-) 600 Protein_1498 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  STCNRZ302_RS07880 (STCNRZ302_07795) trxB 1524490..1525443 (-) 954 WP_255136104.1 thioredoxin-disulfide reductase -
  STCNRZ302_RS07885 (STCNRZ302_07800) - 1525476..1525700 (-) 225 WP_087010135.1 DUF4059 family protein -
  STCNRZ302_RS07890 (STCNRZ302_07805) - 1525915..1526658 (-) 744 WP_084829069.1 amino acid ABC transporter ATP-binding protein -
  STCNRZ302_RS07895 (STCNRZ302_07810) - 1526658..1527404 (-) 747 WP_179970821.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39172.02 Da        Isoelectric Point: 9.3888

>NTDB_id=510739 STCNRZ302_RS07865 WP_011681549.1 1522215..1523291(-) (sepM) [Streptococcus thermophilus strain CNRZ302]
MANKTKSKALLEKMWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVNKKADDSKGSYNFVAVAQTKAT
LALMLYAQFNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAVYQGLTLAGKEVSLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGNTFDNSTDMIKYVQGLKLGSKVKVTYMRDGKEKTATGKIIKIANGKNGIGIGLTDHTEIKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNLVTKEMKKADPD
AKTNYQEAKEAAEKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=510739 STCNRZ302_RS07865 WP_011681549.1 1522215..1523291(-) (sepM) [Streptococcus thermophilus strain CNRZ302]
GTGGCAAACAAGACAAAATCTAAAGCGCTATTAGAGAAAATGTGGCGTATTAAGTGGTGGTTATTAAGTATTTTTACGGT
ACTTTTCCTCCTTTTTGCCCTCTTTTTCCCGCTCAATAATTACTATGTGGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACAGTGAATAAGAAAGCTGATGATTCTAAGGGCTCCTATAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATGCTCTATGCTCAGTTTAATGATTTTGCAAAGCTTCAAACGGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGCATCAACCAATTTTACATGGAGACTTCTCAAAACCAAGCGGTTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGTTAGTTTGGAGTATATGGGTGTCTATGTGCTTCAGGTTGCTGATGATTCTAGCTTCAAGGGTGTCCTCAAT
ATTGCTGATACGGTGACGGCTGTTAATGGTAATACCTTTGATAATTCTACTGACATGATTAAATACGTTCAAGGACTTAA
GCTGGGTTCAAAGGTCAAGGTCACTTATATGAGAGATGGCAAAGAAAAGACTGCTACTGGTAAGATTATTAAGATTGCCA
ATGGCAAAAATGGTATTGGTATCGGCCTAACGGACCATACTGAGATCAAGAGTCCTGAGAATGTTAAGTTTAAACTGGAT
GGTGTCGGTGGGCCAAGTGCTGGTCTTATGTTTACCTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGCAAGATTGCTGGTACAGGAACTATTGAAAAAGATGGGGCTGTCGGTGATATCGGTGGGGCCTATCTCAAGGTGAAAT
CTGCGGCTGATAGTGGCGCAGACATTTTCTTCGTGCCAAATAATCTAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAATTATCAAGAGGCCAAGGAAGCTGCCGAGAAACTGGGGACCAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATGA

Domains


Predicted by InterProScan.

(137-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

62.757

95.251

0.598