Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   KU535_RS08755 Genome accession   NZ_CP077915
Coordinates   1818100..1818900 (-) Length   266 a.a.
NCBI ID   WP_225806562.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 282     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1813100..1823900
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU535_RS08740 (KU535_08695) - 1813674..1814609 (-) 936 WP_000251225.1 dsDNA nuclease domain-containing protein -
  KU535_RS08745 (KU535_08700) rlmH 1814708..1815187 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  KU535_RS08750 (KU535_08705) adsA 1815555..1817873 (-) 2319 WP_000645769.1 LPXTG-anchored adenosine synthase AdsA -
  KU535_RS08755 (KU535_08710) vicX 1818100..1818900 (-) 801 WP_225806562.1 MBL fold metallo-hydrolase Regulator
  KU535_RS08760 (KU535_08715) - 1819296..1820084 (-) 789 WP_001104166.1 two-component system regulatory protein YycI -
  KU535_RS08765 (KU535_08720) yycH 1820085..1821419 (-) 1335 WP_001060140.1 two-component system activity regulator YycH -
  KU535_RS08770 (KU535_08725) walK 1821412..1823238 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30329.52 Da        Isoelectric Point: 6.3392

>NTDB_id=510693 KU535_RS08755 WP_225806562.1 1818100..1818900(-) (vicX) [Staphylococcus aureus strain 282]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKSIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=510693 KU535_RS08755 WP_225806562.1 1818100..1818900(-) (vicX) [Staphylococcus aureus strain 282]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGTGATATGGGACATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAATCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

47.893

98.12

0.47