Detailed information NTG0510668

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: STAVA1121_RS05510
• Genome accession: NZ_CP065488
• Coordinates: 1024481..1025362 (-)
• Length: 293 a.a.
• NCBI ID: WP_347131085.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain AVA1121
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1019481..1030362

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STAVA1121_RS05485 (STAVA1121_05415)	vicR	1020187..1020894 (-)	708	WP_173940375.1	response regulator YycF	Regulator
STAVA1121_RS05490 (STAVA1121_05420)	-	1021420..1022187 (+)	768	WP_179966655.1	amino acid ABC transporter ATP-binding protein	-
STAVA1121_RS05495 (STAVA1121_05425)	-	1022199..1023032 (+)	834	WP_002953142.1	transporter substrate-binding domain-containing protein	-
STAVA1121_RS05500 (STAVA1121_05430)	-	1023050..1023748 (+)	699	WP_065973256.1	amino acid ABC transporter permease	-
STAVA1121_RS05505 (STAVA1121_05435)	-	1023760..1024410 (+)	651	WP_011226088.1	amino acid ABC transporter permease	-
STAVA1121_RS05510 (STAVA1121_05440)	endA	1024481..1025362 (-)	882	WP_347131085.1	DNA/RNA non-specific endonuclease	Machinery gene
STAVA1121_RS05515 (STAVA1121_05445)	-	1025424..1025612 (-)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
STAVA1121_RS05520 (STAVA1121_05450)	murA	1025614..1026885 (-)	1272	WP_041828250.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
STAVA1121_RS05525 (STAVA1121_05455)	-	1026955..1027191 (-)	237	WP_002946959.1	DUF1146 family protein	-
STAVA1121_RS05530 (STAVA1121_05460)	galE	1027379..1028392 (-)	1014	WP_347131087.1	UDP-glucose 4-epimerase GalE	-
STAVA1121_RS05535 (STAVA1121_05465)	-	1028407..1028862 (-)	456	WP_232979644.1	DUF4832 domain-containing protein	-

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31799.63 Da
• Isoelectric Point: 10.2316

>NTDB_id=510668 STAVA1121_RS05510 WP_347131085.1 1024481..1025362(-) (endA) [Streptococcus thermophilus strain AVA1121]
MAKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRKVASLVSGKSNKSIKSNGSTNSQSTPQEQLAETVMT
SLVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLVRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=510668 STAVA1121_RS05510 WP_347131085.1 1024481..1025362(-) (endA) [Streptococcus thermophilus strain AVA1121]
ATGGCAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTGATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCGCCTGATAATCCTATCAGAAAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTGCTGAGACAGTAATGACT
AGTTTAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGATGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTAGTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	72.803	81.57	0.594
endA	Streptococcus pneumoniae D39	72.803	81.57	0.594
endA	Streptococcus pneumoniae R6	72.803	81.57	0.594
endA	Streptococcus pneumoniae TIGR4	72.803	81.57	0.594