Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   STMM20_RS10015 Genome accession   NZ_CP065485
Coordinates   1941950..1942717 (+) Length   255 a.a.
NCBI ID   WP_011681768.1    Uniprot ID   A0A0E2PYL2
Organism   Streptococcus thermophilus strain MM20     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1936950..1947717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STMM20_RS10000 (STMM20_09975) - 1939266..1939949 (-) 684 WP_011226711.1 YoaK family protein -
  STMM20_RS10005 (STMM20_09980) rlmH 1939965..1940444 (-) 480 WP_011681766.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  STMM20_RS10010 (STMM20_09985) htrA 1940649..1941884 (+) 1236 WP_014727759.1 trypsin-like peptidase domain-containing protein Regulator
  STMM20_RS10015 (STMM20_09990) spo0J 1941950..1942717 (+) 768 WP_011681768.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29447.80 Da        Isoelectric Point: 9.4740

>NTDB_id=510509 STMM20_RS10015 WP_011681768.1 1941950..1942717(+) (spo0J) [Streptococcus thermophilus strain MM20]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNVLRLLQLPREIQTSIENGSLSQG
HARALLAIEDSQKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=510509 STMM20_RS10015 WP_011681768.1 1941950..1942717(+) (spo0J) [Streptococcus thermophilus strain MM20]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGTTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCAAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTCTCCCTATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAATAAGCTTATCTAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2PYL2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569