Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   STMM1_RS07800 Genome accession   NZ_CP065484
Coordinates   1498343..1499419 (-) Length   358 a.a.
NCBI ID   WP_180364774.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain MM1     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1493343..1504419
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STMM1_RS07780 (STMM1_07730) - 1494455..1496521 (-) 2067 WP_071417328.1 sodium:proton antiporter -
  STMM1_RS07785 (STMM1_07735) - 1496530..1496772 (-) 243 WP_011226461.1 hypothetical protein -
  STMM1_RS07790 (STMM1_07740) - 1496769..1497317 (-) 549 WP_011226462.1 class I SAM-dependent methyltransferase -
  STMM1_RS07795 (STMM1_07745) - 1497314..1498258 (-) 945 WP_011226463.1 TIGR01212 family radical SAM protein -
  STMM1_RS07800 (STMM1_07750) sepM 1498343..1499419 (-) 1077 WP_180364774.1 SepM family pheromone-processing serine protease Regulator
  STMM1_RS07805 (STMM1_07755) coaD 1499397..1499894 (-) 498 WP_071417329.1 pantetheine-phosphate adenylyltransferase -
  STMM1_RS07810 (STMM1_07760) rsmD 1499928..1500527 (-) 600 Protein_1485 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  STMM1_RS07815 (STMM1_07765) trxB 1500618..1501571 (-) 954 WP_255136104.1 thioredoxin-disulfide reductase -
  STMM1_RS07820 (STMM1_07770) - 1501604..1501828 (-) 225 WP_002951743.1 DUF4059 family protein -
  STMM1_RS07825 (STMM1_07775) - 1502043..1502786 (-) 744 WP_071417330.1 amino acid ABC transporter ATP-binding protein -
  STMM1_RS07830 (STMM1_07780) - 1502786..1503532 (-) 747 WP_142350110.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 358 a.a.        Molecular weight: 39184.05 Da        Isoelectric Point: 9.4944

>NTDB_id=510439 STMM1_RS07800 WP_180364774.1 1498343..1499419(-) (sepM) [Streptococcus thermophilus strain MM1]
MANKTKSKSLLEKMWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVNKKADDSKGSYNFVAVAQTKAT
LALILYAQFNDFAKLQTAEEATGNYSDEDFMRINQFYMETSQNQAVYQGLTLAGKEVSLEYMGVYVLQVADDSSFKGVLN
IADTVTAVNGKTFDNSTDMIKYVQGLKLGSKVKVTYMRDGKEKTATGKIIKIANGKNGIGIGLTDHTEIKSPENVKFKLD
GVGGPSAGLMFTLAIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNLVTKEMKKADPD
AKTNYQEAKEAAEKLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1077 bp        

>NTDB_id=510439 STMM1_RS07800 WP_180364774.1 1498343..1499419(-) (sepM) [Streptococcus thermophilus strain MM1]
GTGGCAAACAAGACAAAATCTAAATCGCTATTAGAGAAAATGTGGCGTATTAAGTGGTGGTTATTAAGTATTTTTACGGT
ACTTTTCCTCCTTTTTGCCCTCTTTTTCCCGCTCAATAATTACTATGTGGAGCTTCCGGGTGGTGCTTTTGATACCAAGG
AAGTCTTGACAGTGAATAAGAAAGCTGATGATTCTAAGGGCTCCTATAATTTTGTGGCGGTGGCTCAAACCAAGGCGACT
TTGGCCTTGATACTCTATGCTCAGTTTAATGATTTTGCAAAGCTTCAAACGGCTGAAGAGGCAACTGGAAATTACTCTGA
TGAAGATTTCATGCGCATCAACCAATTTTACATGGAGACTTCTCAAAACCAAGCGGTTTATCAGGGCTTGACTCTGGCTG
GTAAGGAGGTTAGTTTGGAGTATATGGGTGTCTATGTGCTTCAGGTTGCTGATGATTCTAGCTTCAAGGGTGTCCTCAAT
ATTGCTGATACGGTGACGGCTGTTAATGGTAAGACCTTTGATAATTCTACTGACATGATTAAATACGTTCAGGGACTTAA
GCTGGGTTCAAAGGTCAAGGTCACTTATATGAGAGATGGCAAAGAAAAGACTGCTACTGGTAAGATTATTAAGATTGCCA
ATGGCAAAAATGGTATTGGTATCGGCCTAACGGACCATACTGAGATCAAGAGTCCTGAGAATGTTAAGTTTAAACTGGAT
GGTGTCGGTGGGCCAAGTGCTGGTCTTATGTTTACCTTGGCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGG
CCGCAAGATTGCTGGTACAGGAACTATTGAAAAAGATGGGGCTGTCGGTGATATCGGTGGGGCCTATCTCAAGGTGAAAT
CTGCGGCTGATAGTGGCGCAGACATTTTCTTCGTGCCAAATAATCTAGTAACTAAGGAAATGAAAAAGGCTGATCCGGAT
GCCAAGACTAATTATCAAGAGGCCAAGGAAGCTGCCGAGAAACTGGGGACAAAGATGAAAATCGTCCCTGTTAAAACAGC
TCAAGAAGCCATTGATTATTTGAAAAAGACTAAATGA

Domains


Predicted by InterProScan.

(137-206)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

63.05

95.251

0.601