Detailed information NTG0510420

Bioinformatically predicted

Overview

• Name: endA
• Type: Machinery gene
• Locus tag: STMM1_RS04090
• Genome accession: NZ_CP065484
• Coordinates: 768615..769496 (+)
• Length: 293 a.a.
• NCBI ID: WP_071417356.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain MM1
• Function: cleavage of dsDNA into ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 763615..774496

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STMM1_RS04060 (STMM1_04020)	-	764625..765077 (+)	453	WP_050983521.1	hypothetical protein	-
STMM1_RS04065 (STMM1_04025)	-	765067..765570 (+)	504	WP_224102963.1	DUF4832 domain-containing protein	-
STMM1_RS04070 (STMM1_04030)	galE	765585..766598 (+)	1014	WP_014727437.1	UDP-glucose 4-epimerase GalE	-
STMM1_RS04075 (STMM1_04035)	-	766786..767022 (+)	237	WP_002946959.1	DUF1146 family protein	-
STMM1_RS04080 (STMM1_04040)	murA	767092..768363 (+)	1272	WP_024704149.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
STMM1_RS04085 (STMM1_04045)	-	768365..768553 (+)	189	WP_011226090.1	DNA-directed RNA polymerase subunit beta	-
STMM1_RS04090 (STMM1_04050)	endA	768615..769496 (+)	882	WP_071417356.1	DNA/RNA non-specific endonuclease	Machinery gene
STMM1_RS04095 (STMM1_04055)	-	769567..770217 (-)	651	WP_014608375.1	amino acid ABC transporter permease	-
STMM1_RS04100 (STMM1_04060)	-	770229..770927 (-)	699	WP_014608374.1	amino acid ABC transporter permease	-
STMM1_RS04105 (STMM1_04065)	-	770945..771778 (-)	834	WP_011681208.1	transporter substrate-binding domain-containing protein	-
STMM1_RS04110 (STMM1_04070)	-	771790..772557 (-)	768	WP_011681207.1	amino acid ABC transporter ATP-binding protein	-
STMM1_RS04115 (STMM1_04075)	vicR	773084..773791 (+)	708	WP_011681206.1	response regulator YycF	Regulator

Sequence

Protein

• Length: 293 a.a.
• Molecular weight: 31831.58 Da
• Isoelectric Point: 10.1789

>NTDB_id=510420 STMM1_RS04090 WP_071417356.1 768615..769496(+) (endA) [Streptococcus thermophilus strain MM1]
MVKRKTSLTNKQKRQLVTLIIAALIAVLGYLGTSNKLSPDNPIRQVASLVSGKSNKSIKSNGSTNSQSTPQEQLSETVMT
SSVKSQLGNSLEWNGAGAYIINRNKTNLNAKVSSQPYANNQVKTVQGQTVPTVANALLSKATRQYKNRQETGNGSTSWTP
AGWHQVQNLSGEYSHAVDRGHLLGYALIGGLKGFDASTSNPENIAVQTAWANQAYSDSSTGQNYYESLLRKALDKNKRVR
YRVTLIYEGENLIPSGTHLEAKSADGSLEFNVFVPNVQEGITLDYYSGKVTVN

Nucleotide

• Length: 882 bp

>NTDB_id=510420 STMM1_RS04090 WP_071417356.1 768615..769496(+) (endA) [Streptococcus thermophilus strain MM1]
ATGGTAAAAAGAAAGACATCTTTGACAAATAAACAGAAACGTCAGTTAGTCACATTAATAATAGCAGCTTTAATAGCTGT
TTTAGGTTACCTAGGAACCAGTAACAAGCTCTCTCCTGATAATCCTATCAGACAAGTAGCAAGCCTAGTTTCAGGGAAAT
CTAACAAATCCATTAAATCTAATGGTTCAACAAATAGTCAGTCTACACCACAAGAGCAGCTTTCTGAGACAGTAATGACT
AGTTCAGTCAAAAGCCAACTGGGTAATTCCTTGGAATGGAATGGAGCTGGGGCCTACATTATTAATAGAAATAAGACGAA
TCTAAATGCTAAGGTATCAAGCCAACCCTATGCTAATAACCAAGTCAAAACGGTTCAAGGACAAACTGTTCCTACAGTTG
CTAATGCCTTATTAAGTAAAGCAACTAGACAGTACAAAAATCGTCAAGAAACAGGGAATGGTTCAACCTCTTGGACACCA
GCTGGATGGCACCAGGTTCAAAATTTATCAGGAGAGTATAGCCATGCCGTAGATAGAGGCCATTTGCTAGGTTATGCACT
GATAGGTGGTTTGAAAGGATTTGACGCCTCGACTTCAAATCCAGAGAATATTGCTGTTCAAACTGCTTGGGCAAATCAAG
CATATAGCGATAGTTCTACAGGCCAAAACTATTATGAAAGCCTATTACGAAAAGCTCTGGATAAAAACAAACGTGTTCGT
TATCGTGTGACCCTGATTTATGAAGGAGAGAATCTCATTCCATCAGGAACACATCTTGAAGCTAAGTCAGCAGACGGCTC
ACTTGAGTTTAATGTCTTTGTTCCAAATGTACAAGAGGGAATTACACTAGATTACTATTCAGGAAAAGTAACGGTGAATT
GA

Domains

Predicted by InterproScan.

• DNA/RNA non-specific endonuclease (Endonuclease_NS) (101-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
endA	Streptococcus pneumoniae Rx1	71.967	81.57	0.587
endA	Streptococcus pneumoniae D39	71.967	81.57	0.587
endA	Streptococcus pneumoniae R6	71.967	81.57	0.587
endA	Streptococcus pneumoniae TIGR4	71.967	81.57	0.587