Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   Q7C_RS08490 Genome accession   NC_017856
Coordinates   1766828..1767238 (+) Length   136 a.a.
NCBI ID   WP_014704325.1    Uniprot ID   I1YJ12
Organism   Methylophaga frappieri     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1761828..1772238
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Q7C_RS08470 (Q7C_1760) - 1761855..1762508 (+) 654 WP_041367042.1 HAD family hydrolase -
  Q7C_RS08475 (Q7C_1761) gatB 1762558..1764000 (+) 1443 WP_014704322.1 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB -
  Q7C_RS08480 (Q7C_1762) - 1764185..1765327 (+) 1143 WP_014704323.1 FIST signal transduction protein -
  Q7C_RS08485 (Q7C_1763) gshA 1765329..1766603 (-) 1275 WP_014704324.1 glutamate--cysteine ligase -
  Q7C_RS08490 (Q7C_1764) pilG 1766828..1767238 (+) 411 WP_014704325.1 twitching motility response regulator PilG Regulator
  Q7C_RS08495 (Q7C_1765) pilH 1767242..1767607 (+) 366 WP_014704326.1 twitching motility response regulator PilH -
  Q7C_RS08500 (Q7C_1766) - 1767610..1768161 (+) 552 WP_014704327.1 chemotaxis protein CheW -
  Q7C_RS08505 (Q7C_1767) - 1768183..1769445 (+) 1263 WP_014704328.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 136 a.a.        Molecular weight: 15200.61 Da        Isoelectric Point: 6.9274

>NTDB_id=51035 Q7C_RS08490 WP_014704325.1 1766828..1767238(+) (pilG) [Methylophaga frappieri]
MSETLTEFTGLKVMVIDDSKTIRRSAESLLQKAGCDVITADNGFEALPLISAKHPDILFIDIMMPRLDGYQTCALVKNNP
AYRQIPVIMLSSKDGLFDRAKGRMVGAEQYLTKPFTREDLLDAIRRYCAPANNKES

Nucleotide


Download         Length: 411 bp        

>NTDB_id=51035 Q7C_RS08490 WP_014704325.1 1766828..1767238(+) (pilG) [Methylophaga frappieri]
GTGAGCGAAACCTTGACAGAATTTACCGGCCTGAAAGTGATGGTCATCGATGACAGTAAAACGATTCGGCGCAGCGCAGA
ATCTTTGCTTCAAAAAGCCGGCTGTGACGTTATCACGGCTGATAATGGTTTTGAAGCGCTGCCGCTAATTAGTGCAAAAC
ATCCGGACATTCTTTTTATCGACATTATGATGCCCCGCCTAGATGGCTATCAAACCTGTGCGCTGGTCAAAAATAATCCT
GCTTATCGGCAGATCCCGGTCATCATGTTATCAAGCAAAGATGGTTTGTTTGATCGGGCCAAAGGTCGCATGGTTGGTGC
AGAACAATATCTGACCAAACCTTTTACCCGTGAAGACCTGCTGGATGCCATTCGCCGTTATTGCGCGCCCGCCAACAACA
AGGAGAGCTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(13-125)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I1YJ12

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

69.672

89.706

0.625

Multiple sequence alignment