Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   STCNRZ760_RS02280 Genome accession   NZ_CP065482
Coordinates   417736..418179 (+) Length   147 a.a.
NCBI ID   WP_002945408.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain CNRZ760     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 412736..423179
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  STCNRZ760_RS02260 (STCNRZ760_02235) - 413255..414009 (-) 755 Protein_384 NUDIX hydrolase -
  STCNRZ760_RS02265 (STCNRZ760_02240) - 414073..415180 (-) 1108 Protein_385 AAA family ATPase -
  STCNRZ760_RS02270 (STCNRZ760_02245) gdhA 415524..416876 (+) 1353 WP_011680803.1 NADP-specific glutamate dehydrogenase -
  STCNRZ760_RS02275 (STCNRZ760_02250) - 417134..417544 (+) 411 WP_011225559.1 peptide deformylase -
  STCNRZ760_RS02280 (STCNRZ760_02255) rcrR 417736..418179 (+) 444 WP_002945408.1 MarR family transcriptional regulator Regulator
  STCNRZ760_RS02285 (STCNRZ760_02260) rcrP 418183..419997 (+) 1815 WP_180481208.1 ABC transporter ATP-binding protein Regulator
  STCNRZ760_RS02290 (STCNRZ760_02265) rcrQ 419987..421765 (+) 1779 WP_180481209.1 ABC transporter ATP-binding protein Regulator
  STCNRZ760_RS02295 (STCNRZ760_02270) - 421920..422291 (+) 372 WP_224103327.1 GNAT family acetyltransferase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17031.41 Da        Isoelectric Point: 9.5790

>NTDB_id=510295 STCNRZ760_RS02280 WP_002945408.1 417736..418179(+) (rcrR) [Streptococcus thermophilus strain CNRZ760]
MHGKDPFSDFREFINTMESRVQELGKAYGVEHLAGPQGFAVRYLFENQDKEIFIKDIEKKLSISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKAQDVGHFREAIHGQLLDGISKEDAETAFRVFHQIRKNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=510295 STCNRZ760_RS02280 WP_002945408.1 417736..418179(+) (rcrR) [Streptococcus thermophilus strain CNRZ760]
ATGCATGGGAAAGATCCTTTTAGTGACTTCAGAGAATTCATCAATACTATGGAGTCTCGCGTGCAAGAGTTAGGTAAAGC
GTATGGCGTTGAGCATTTAGCTGGTCCACAAGGGTTTGCCGTTAGGTACTTGTTTGAGAACCAAGATAAAGAAATATTTA
TCAAAGATATTGAGAAAAAACTATCTATTTCCAAGTCAGTGGCTAGTAATTTGGTCAAACGTATGGAGAAAAATGGTTTT
GTTGAATTGGTGACATCTGACAAGGACAAACGCTACAAGTATGTTCATCTGACAGACTTAGGCAAAAAGAAGGCTCAAGA
CGTCGGACATTTCCGAGAGGCTATCCATGGACAGTTATTAGATGGTATTTCGAAAGAAGATGCTGAAACAGCATTTCGAG
TCTTTCACCAAATTCGTAAGAATTTAGAGAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(42-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

56.028

95.918

0.537