Detailed information NTG0051027

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: Q7C_RS02940
• Genome accession: NC_017856
• Coordinates: 665793..666842 (+)
• Length: 349 a.a.
• NCBI ID: WP_041366451.1
• Uniprot ID: -
• Organism: Methylophaga frappieri
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 660793..671842

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q7C_RS02915 (Q7C_602)	coaD	660849..661340 (-)	492	WP_014703196.1	pantetheine-phosphate adenylyltransferase	-
Q7C_RS02920 (Q7C_603)	-	661446..662282 (-)	837	WP_187287369.1	alpha/beta hydrolase	-
Q7C_RS02925 (Q7C_604)	rsmD	662503..663084 (-)	582	WP_014703198.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
Q7C_RS02930 (Q7C_605)	-	663065..664372 (-)	1308	WP_014703199.1	M16 family metallopeptidase	-
Q7C_RS02935 (Q7C_606)	-	664362..665729 (-)	1368	WP_014703200.1	M16 family metallopeptidase	-
Q7C_RS02940 (Q7C_607)	pilA	665793..666842 (+)	1050	WP_041366451.1	signal recognition particle-docking protein FtsY	Machinery gene
Q7C_RS02945 (Q7C_608)	ftsE	666839..667495 (+)	657	WP_014703202.1	cell division ATP-binding protein FtsE	-
Q7C_RS02950 (Q7C_609)	ftsX	667495..668424 (+)	930	WP_014703203.1	permease-like cell division protein FtsX	-
Q7C_RS02955 (Q7C_610)	rpoH	668530..669393 (+)	864	WP_014703204.1	RNA polymerase sigma factor RpoH	-
Q7C_RS02960 (Q7C_611)	fdxA	669459..669782 (-)	324	WP_014703205.1	ferredoxin FdxA	-
Q7C_RS02965 (Q7C_612)	-	669924..670220 (+)	297	WP_014703206.1	lipopolysaccharide assembly protein LapA domain-containing protein	-
Q7C_RS02970 (Q7C_613)	lapB	670224..671411 (+)	1188	WP_014703207.1	lipopolysaccharide assembly protein LapB	-
Q7C_RS02975 (Q7C_614)	arsC	671408..671758 (+)	351	WP_014703208.1	arsenate reductase (glutaredoxin)	-

Sequence

Protein

• Length: 349 a.a.
• Molecular weight: 37554.01 Da
• Isoelectric Point: 5.9778

>NTDB_id=51027 Q7C_RS02940 WP_041366451.1 665793..666842(+) (pilA) [Methylophaga frappieri]
MFSFLKKKSRTPDTVAETAAEAAPYQTDTAPAAQSVADKRPGIFNRLRQGLKRTSQQLTDGFANLLLGKKEIDDDLLEEL
ETQLLSADLGIDATQAIISDLTQQVARKQLSDPEALFTALRNNMVAMLKPVAQPLQLDPSNGPFVILMVGINGVGKTTTI
GKLAKQYQQQGHAVMLAAGDTFRAAAVEQLQVWGERNQIPVIAQQHGADSASVIFDALQAAKARKIDVLIADTAGRLHTQ
SNLMEELKKVKRVMSKIDPIAPHEIMLVVDAGTGQNALSQAKQFHAAVGLTGITLTKLDGTAKGGIIFAIAHQTGLPIRY
IGIGEQIDDLRTFEADDFVDALLGREDAA

Nucleotide

• Length: 1050 bp

>NTDB_id=51027 Q7C_RS02940 WP_041366451.1 665793..666842(+) (pilA) [Methylophaga frappieri]
ATGTTTAGTTTCCTGAAAAAAAAATCTCGCACACCGGATACCGTTGCAGAGACAGCTGCTGAAGCAGCACCCTACCAGAC
CGATACCGCGCCTGCAGCACAATCTGTAGCAGATAAGCGCCCCGGCATATTTAATCGTCTTCGACAAGGCCTGAAACGGA
CCAGTCAGCAACTCACAGATGGGTTTGCTAACTTGTTGCTGGGTAAAAAAGAAATCGATGACGATTTGCTTGAGGAACTG
GAAACCCAATTACTTTCCGCCGATTTGGGTATCGATGCCACCCAGGCTATTATTTCCGATCTCACTCAGCAAGTTGCGCG
CAAACAGCTCTCTGATCCAGAAGCCTTGTTCACGGCATTGCGTAATAACATGGTTGCCATGCTGAAACCGGTGGCACAAC
CGCTGCAGCTCGACCCTTCAAACGGCCCTTTCGTGATTTTGATGGTGGGCATTAACGGTGTTGGTAAAACGACAACTATC
GGTAAGCTGGCAAAACAATATCAACAACAGGGACATGCCGTCATGCTGGCGGCCGGCGACACGTTTCGAGCCGCCGCAGT
TGAACAATTGCAAGTCTGGGGGGAGCGTAATCAAATTCCGGTTATTGCCCAACAGCATGGTGCCGATTCCGCTTCCGTGA
TTTTTGATGCACTGCAGGCTGCCAAGGCCCGCAAGATTGATGTCCTGATCGCCGATACTGCGGGACGCTTGCATACCCAA
TCCAATCTTATGGAAGAGTTGAAAAAAGTGAAACGTGTGATGAGTAAGATCGACCCCATTGCGCCACACGAAATCATGCT
GGTAGTCGATGCCGGTACCGGACAGAATGCACTATCTCAGGCGAAACAATTTCATGCCGCAGTTGGGCTGACAGGCATTA
CGCTCACCAAACTCGATGGCACTGCCAAGGGCGGTATTATTTTCGCAATTGCACACCAAACCGGACTACCGATTCGATAT
ATCGGTATAGGTGAGCAAATCGATGATTTGCGCACTTTTGAAGCAGACGATTTCGTCGATGCGTTATTGGGGCGTGAAGA
CGCAGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (143-344)

• SRP54-type protein, helical bundle domain (SRP54_N) (58-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.87	94.842	0.501