Detailed information NTG0510209

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: ST90729_RS08660
• Genome accession: NZ_CP065480
• Coordinates: 1684594..1685955 (-)
• Length: 453 a.a.
• NCBI ID: WP_080998440.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain 90729
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1679594..1690955

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ST90729_RS08630 (ST90729_08595)	-	1680024..1681280 (+)	1257	WP_179967061.1	ISL3-like element ISSth1 family transposase	-
ST90729_RS08635 (ST90729_08600)	rplA	1681339..1682028 (-)	690	WP_002946412.1	50S ribosomal protein L1	-
ST90729_RS08640 (ST90729_08605)	rplK	1682128..1682553 (-)	426	WP_002953535.1	50S ribosomal protein L11	-
ST90729_RS08645 (ST90729_08610)	-	1682725..1683078 (+)	354	WP_002953536.1	DUF3397 domain-containing protein	-
ST90729_RS08650 (ST90729_08615)	-	1683170..1683667 (-)	498	WP_002947059.1	carbonic anhydrase	-
ST90729_RS08655 (ST90729_08620)	-	1683809..1684505 (-)	697	Protein_1647	TIGR00266 family protein	-
ST90729_RS08660 (ST90729_08625)	radA	1684594..1685955 (-)	1362	WP_080998440.1	DNA repair protein RadA	Machinery gene
ST90729_RS08665 (ST90729_08630)	-	1686133..1686579 (-)	447	WP_002947069.1	dUTP diphosphatase	-
ST90729_RS08670 (ST90729_08635)	-	1686793..1687395 (+)	603	Protein_1650	NADPH-dependent FMN reductase	-
ST90729_RS08675 (ST90729_08640)	-	1687414..1688665 (+)	1252	Protein_1651	NAD(P)H-dependent oxidoreductase	-
ST90729_RS08680 (ST90729_08645)	-	1688783..1689573 (+)	791	Protein_1652	formate/nitrite transporter family protein	-
ST90729_RS08685 (ST90729_08650)	-	1689582..1690154 (+)	573	Protein_1653	MptD family putative ECF transporter S component	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 49418.80 Da
• Isoelectric Point: 6.6528

>NTDB_id=510209 ST90729_RS08660 WP_080998440.1 1684594..1685955(-) (radA) [Streptococcus thermophilus strain 90729]
MAKKKSTFVCRECGYNSPKYLGRCPNCSSWSSFEEEVEVQEVKNARVSLTGEKSKPTKLKEVSSISYARIKTDMDEFNRV
LGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLANKGTVLYVSGEESAEQIKLRSERLGDIDNEFYLYAETNMQAVRSQVE
GIKPDFLIIDSIQTIMSPEISGVQGSVSQVREVTAELIQIAKTNNIATFIVGHVTKEGQLAGPRMLEHMVDTVLYFEGER
HHTFRILRAVKNRFGSTNEIGIFEMQSGGLVEVLNPSQVFLEERLDGATGSAIVVTMEGSRPILAEVQALVTPTVFGNAK
RTTTGLDFNRVSLIMAVLEKRCGLLLQNQDAYLKSAGGVKLDEPAIDLAVAVAIASSYKELPTNPQEAFVGEIGLTGEIR
RVTRIEQRINEAAKLGFTKIYVPKNSLHGMKIPEGIQVIGVTTVGEVLKKVFS

Nucleotide

• Length: 1362 bp

>NTDB_id=510209 ST90729_RS08660 WP_080998440.1 1684594..1685955(-) (radA) [Streptococcus thermophilus strain 90729]
ATAGCTAAGAAAAAATCAACTTTTGTTTGTAGAGAATGTGGCTACAATTCACCCAAATATCTAGGGCGCTGTCCCAATTG
TTCTTCTTGGTCCTCTTTTGAGGAAGAGGTTGAGGTGCAGGAGGTTAAAAATGCCCGTGTCAGTTTGACGGGTGAAAAGT
CCAAACCTACTAAGTTAAAAGAAGTCTCTTCAATTAGTTATGCCCGCATAAAAACCGATATGGACGAGTTTAACCGTGTT
TTAGGTGGCGGTGTGGTTCCGGGGAGTTTGGTTCTTATTGGAGGAGATCCAGGAATAGGGAAATCGACCCTCCTCTTACA
GGTGTCAACACAGCTGGCTAACAAGGGAACTGTCCTCTATGTTTCTGGGGAAGAATCGGCCGAGCAAATCAAATTGCGGA
GTGAACGTTTAGGTGATATTGATAACGAATTTTATCTGTATGCTGAGACCAATATGCAAGCAGTCCGTAGTCAAGTGGAG
GGTATCAAACCCGATTTCCTCATTATTGATTCTATTCAGACCATCATGAGCCCAGAGATCTCTGGCGTTCAAGGTTCTGT
TTCCCAGGTTCGTGAAGTAACTGCCGAACTCATACAGATTGCCAAAACCAATAACATTGCCACTTTCATTGTTGGGCATG
TGACCAAGGAGGGACAGCTGGCTGGACCACGTATGTTGGAGCACATGGTGGATACTGTGCTTTATTTTGAGGGGGAACGT
CATCATACCTTCCGTATTCTGAGGGCAGTTAAAAACCGTTTTGGTTCAACCAATGAGATTGGGATTTTTGAAATGCAGTC
AGGTGGTCTGGTCGAGGTACTAAACCCTAGCCAAGTTTTCTTAGAAGAACGCCTAGACGGTGCCACAGGTTCTGCCATTG
TTGTCACAATGGAGGGGAGTCGACCTATCCTAGCTGAGGTTCAAGCTTTGGTGACACCGACCGTCTTTGGTAACGCAAAG
CGGACAACGACGGGACTGGACTTTAACCGTGTCAGCCTTATCATGGCTGTCTTAGAGAAACGTTGCGGCCTTCTTCTCCA
AAATCAAGATGCCTATCTCAAATCAGCTGGTGGTGTCAAGTTGGACGAGCCAGCTATTGACCTTGCAGTTGCCGTTGCTA
TCGCTTCTAGTTACAAGGAGCTTCCAACCAATCCACAAGAAGCCTTCGTAGGAGAGATTGGCTTGACCGGAGAGATTCGT
CGTGTGACTCGTATTGAGCAGCGTATCAATGAAGCCGCTAAACTAGGTTTTACTAAGATTTATGTTCCTAAAAATTCGCT
TCATGGCATGAAGATTCCAGAAGGTATCCAGGTCATTGGGGTCACAACGGTAGGAGAAGTACTCAAAAAAGTCTTTTCTT
AA

Domains

Predicted by InterproScan.

• AAA domain (AAA_25) (61-218)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• Subunit ChlI of Mg-chelatase (ChlI) (360-425)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Streptococcus pneumoniae Rx1	88.962	100	0.89
radA	Streptococcus pneumoniae D39	88.962	100	0.89
radA	Streptococcus pneumoniae R6	88.962	100	0.89
radA	Streptococcus pneumoniae TIGR4	88.962	100	0.89
radA	Streptococcus mitis NCTC 12261	88.962	100	0.89
radA	Streptococcus mitis SK321	88.962	100	0.89
radA	Bacillus subtilis subsp. subtilis str. 168	61.148	100	0.611