Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   KU540_RS13200 Genome accession   NZ_CP077894
Coordinates   2635257..2635931 (-) Length   224 a.a.
NCBI ID   WP_001166503.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 329     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2630257..2640931
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU540_RS13185 (KU540_13110) - 2631437..2633326 (-) 1890 WP_000009407.1 FtsX-like permease family protein -
  KU540_RS13190 (KU540_13115) vraF 2633316..2634077 (-) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  KU540_RS13195 (KU540_13120) graS 2634224..2635264 (-) 1041 WP_001061270.1 histidine kinase GraS/ApsS -
  KU540_RS13200 (KU540_13125) braR 2635257..2635931 (-) 675 WP_001166503.1 response regulator transcription factor GraR/ApsR Regulator
  KU540_RS13205 (KU540_13130) graX 2635947..2636870 (-) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  KU540_RS13210 (KU540_13135) - 2636983..2637489 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  KU540_RS13215 (KU540_13140) - 2637700..2638128 (-) 429 WP_000198504.1 hypothetical protein -
  KU540_RS13220 (KU540_13145) - 2638457..2639500 (-) 1044 WP_001030756.1 alpha/beta hydrolase -
  KU540_RS13225 (KU540_13150) - 2639651..2640718 (-) 1068 WP_000980142.1 membrane protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26048.89 Da        Isoelectric Point: 4.3968

>NTDB_id=510167 KU540_RS13200 WP_001166503.1 2635257..2635931(-) (braR) [Staphylococcus aureus strain 329]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGDQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=510167 KU540_RS13200 WP_001166503.1 2635257..2635931(-) (braR) [Staphylococcus aureus strain 329]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGCCGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGATCAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCTAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.364

98.214

0.406