Detailed information    

insolico Bioinformatically predicted

Overview

Name   luxS   Type   Regulator
Locus tag   KU540_RS05290 Genome accession   NZ_CP077894
Coordinates   1096052..1096522 (-) Length   156 a.a.
NCBI ID   WP_000164421.1    Uniprot ID   P65329
Organism   Staphylococcus aureus strain 329     
Function   induction of competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1091052..1101522
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU540_RS05260 (KU540_05225) - 1091087..1091500 (+) 414 WP_001123306.1 thiol-disulfide oxidoreductase DCC family protein -
  KU540_RS05265 (KU540_05230) - 1091700..1092143 (+) 444 WP_000070865.1 Dps family protein -
  KU540_RS05270 (KU540_05235) deoD 1092264..1092974 (-) 711 WP_000160304.1 purine-nucleoside phosphorylase -
  KU540_RS05275 (KU540_05240) deoC 1093289..1093951 (+) 663 WP_001083321.1 deoxyribose-phosphate aldolase -
  KU540_RS05280 (KU540_05245) - 1094235..1095536 (+) 1302 WP_225805907.1 pyrimidine-nucleoside phosphorylase -
  KU540_RS05285 (KU540_05250) - 1095550..1095900 (+) 351 WP_001024033.1 membrane protein -
  KU540_RS05290 (KU540_05255) luxS 1096052..1096522 (-) 471 WP_000164421.1 S-ribosylhomocysteine lyase Regulator
  KU540_RS05295 (KU540_05260) - 1096865..1098049 (+) 1185 WP_001291503.1 M20 family metallopeptidase -
  KU540_RS05300 (KU540_05265) ldmS 1098049..1099242 (+) 1194 WP_000186240.1 L-aspartate--L-methionine ligase LdmS -
  KU540_RS05305 (KU540_05270) - 1099640..1100311 (+) 672 WP_000120549.1 DUF2750 domain-containing protein -
  KU540_RS05310 (KU540_05275) coaW 1100442..1101245 (-) 804 WP_000689738.1 type II pantothenate kinase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 17513.76 Da        Isoelectric Point: 5.4567

>NTDB_id=510096 KU540_RS05290 WP_000164421.1 1096052..1096522(-) (luxS) [Staphylococcus aureus strain 329]
MTKMNVESFNLDHTKVVAPFIRLAGTMEGLNGDVIHKYDIRFKQPNKEHMDMPGLHSLEHLMAENIRNHSDKVVDLSPMG
CQTGFYVSFINHDNYDDVLNIVEATLNDVLNATEVPACNEVQCGWAASHSLEGAKTIAQAFLDKRNEWHDVFGTGK

Nucleotide


Download         Length: 471 bp        

>NTDB_id=510096 KU540_RS05290 WP_000164421.1 1096052..1096522(-) (luxS) [Staphylococcus aureus strain 329]
ATGACAAAAATGAATGTTGAAAGTTTCAATTTAGATCATACTAAAGTGGTTGCCCCATTTATTAGATTAGCGGGAACGAT
GGAAGGATTAAACGGAGATGTCATTCACAAATACGACATTCGTTTCAAACAACCAAACAAAGAACATATGGATATGCCTG
GATTGCATTCATTAGAACATTTAATGGCTGAAAATATTAGAAATCATAGTGACAAAGTCGTTGATTTAAGTCCTATGGGT
TGCCAAACTGGTTTCTATGTATCATTTATTAATCATGATAATTATGATGATGTACTAAATATTGTTGAAGCAACTTTAAA
TGATGTGCTAAATGCTACTGAAGTGCCTGCTTGTAATGAAGTACAATGTGGCTGGGCAGCAAGTCATTCATTAGAAGGTG
CTAAAACTATCGCTCAAGCATTTCTAGACAAACGAAACGAATGGCATGATGTTTTCGGTACAGGAAAATAA

Domains

Predicted by InterProScan.

S-Ribosylhomocysteinase (LuxS) (LuxS)

(5-148)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P65329

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxS Vibrio cholerae strain A1552

44.681

90.385

0.404