Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   KU540_RS00810 Genome accession   NZ_CP077894
Coordinates   143907..144752 (-) Length   281 a.a.
NCBI ID   WP_001621659.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 329     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 138907..149752
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU540_RS00775 (KU540_00770) rpsR 139895..140137 (-) 243 WP_000897044.1 30S ribosomal protein S18 -
  KU540_RS00780 (KU540_00775) ssbA 140189..140692 (-) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  KU540_RS00785 (KU540_00780) rpsF 140713..141009 (-) 297 WP_001261460.1 30S ribosomal protein S6 -
  KU540_RS00790 (KU540_00785) - 141253..141444 (+) 192 WP_001052488.1 hypothetical protein -
  KU540_RS00795 (KU540_00790) ychF 141530..142627 (-) 1098 WP_001218729.1 redox-regulated ATPase YchF -
  KU540_RS00800 (KU540_00795) - 142639..142842 (-) 204 WP_000157348.1 DUF951 domain-containing protein -
  KU540_RS00805 (KU540_00800) - 142872..143753 (-) 882 WP_000373079.1 mechanosensitive ion channel family protein -
  KU540_RS00810 (KU540_00805) spo0J 143907..144752 (-) 846 WP_001621659.1 ParB/RepB/Spo0J family partition protein Regulator
  KU540_RS00815 (KU540_00810) - 145414..146517 (+) 1104 WP_000655696.1 PLP-dependent transferase -
  KU540_RS00820 (KU540_00815) metC 146514..147674 (+) 1161 WP_000175862.1 cystathionine beta-lyase MetC -
  KU540_RS00825 (KU540_00820) - 147643..149484 (+) 1842 WP_000077315.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32797.82 Da        Isoelectric Point: 10.0000

>NTDB_id=510085 KU540_RS00810 WP_001621659.1 143907..144752(-) (spo0J) [Staphylococcus aureus strain 329]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=510085 KU540_RS00810 WP_001621659.1 143907..144752(-) (spo0J) [Staphylococcus aureus strain 329]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCGCAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381