Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   SCR2_RS04020 Genome accession   NC_022245
Coordinates   806456..806926 (+) Length   156 a.a.
NCBI ID   WP_003031692.1    Uniprot ID   F9P5V6
Organism   Streptococcus constellatus subsp. pharyngis C818     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 801456..811926
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCR2_RS10615 (SCR2_0790) - 803678..804082 (+) 405 WP_006267075.1 DUF805 domain-containing protein -
  SCR2_RS10620 - 804173..804313 (+) 141 WP_022525502.1 hypothetical protein -
  SCR2_RS04010 (SCR2_0791) - 804758..805744 (+) 987 WP_020997763.1 Gfo/Idh/MocA family protein -
  SCR2_RS04015 (SCR2_0792) - 805766..806419 (+) 654 WP_003034489.1 uracil-DNA glycosylase -
  SCR2_RS04020 (SCR2_0793) mutX 806456..806926 (+) 471 WP_003031692.1 NUDIX hydrolase Machinery gene
  SCR2_RS04025 (SCR2_0794) - 806939..808216 (+) 1278 WP_020997764.1 dihydroorotase -
  SCR2_RS04030 (SCR2_0795) metK 808482..809672 (+) 1191 WP_006267269.1 methionine adenosyltransferase -
  SCR2_RS04035 (SCR2_0796) - 810089..811348 (+) 1260 WP_003034537.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -

Sequence

Protein


Download         Length: 156 a.a.        Molecular weight: 18052.50 Da        Isoelectric Point: 4.7883

>NTDB_id=51002 SCR2_RS04020 WP_003031692.1 806456..806926(+) (mutX) [Streptococcus constellatus subsp. pharyngis C818]
MVKLATICYIDNGKEFLLLHRNKKPNDVHAGKWIGVGGKLEKGETPQECAVREIFEETGLRVNKPVLKGIITFPDFTPNH
DWYTYVFKVTEFEGDLIDCDEGTLEWVPYEQVLSKPTWEGDHTFLSWILEDKPFFSAKFSYKGEKLVESHVDFYGE

Nucleotide


Download         Length: 471 bp        

>NTDB_id=51002 SCR2_RS04020 WP_003031692.1 806456..806926(+) (mutX) [Streptococcus constellatus subsp. pharyngis C818]
ATGGTTAAGTTAGCAACGATTTGCTATATTGACAACGGCAAAGAATTTTTATTGCTACATCGAAATAAAAAGCCTAATGA
TGTTCATGCTGGTAAGTGGATTGGTGTTGGGGGTAAATTAGAGAAAGGTGAAACGCCGCAGGAGTGCGCTGTAAGAGAAA
TCTTTGAAGAAACAGGTTTGCGGGTCAATAAGCCAGTATTAAAAGGTATTATCACGTTTCCAGATTTTACACCTAACCAT
GATTGGTATACCTATGTATTTAAAGTGACGGAGTTTGAGGGAGACTTGATTGACTGCGATGAGGGGACTTTGGAATGGGT
GCCTTATGAACAAGTTTTGTCCAAACCAACTTGGGAGGGAGATCATACGTTTCTATCTTGGATTTTAGAAGATAAACCAT
TCTTCTCGGCTAAATTTTCTTACAAAGGAGAGAAGTTGGTGGAGAGTCATGTTGATTTTTATGGAGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB F9P5V6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.818

98.718

0.808

Multiple sequence alignment