Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | ABTJ_RS01610 | Genome accession | NC_017847 |
| Coordinates | 347595..348077 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046420.1 | Uniprot ID | A0A7U3Y2Y6 |
| Organism | Acinetobacter baumannii MDR-TJ | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 342595..353077
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABTJ_RS01600 (ABTJ_00325) | pilX | 342898..343716 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| ABTJ_RS01605 (ABTJ_00326) | pilY1 | 343728..347582 (+) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ABTJ_RS01610 (ABTJ_00327) | pilY2 | 347595..348077 (+) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| ABTJ_RS01615 (ABTJ_00328) | pilE | 348074..348499 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| ABTJ_RS01620 (ABTJ_00329) | rpsP | 348646..348897 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABTJ_RS01625 (ABTJ_00330) | rimM | 348917..349465 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ABTJ_RS01630 (ABTJ_00331) | trmD | 349511..350251 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABTJ_RS01635 (ABTJ_00332) | rplS | 350460..350828 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ABTJ_RS01640 (ABTJ_00333) | - | 350881..351822 (-) | 942 | WP_085916958.1 | triacylglycerol lipase | - |
| ABTJ_RS01645 (ABTJ_00334) | - | 351937..352971 (-) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17548.77 Da Isoelectric Point: 8.4817
>NTDB_id=50989 ABTJ_RS01610 WP_001046420.1 347595..348077(+) (pilY2) [Acinetobacter baumannii MDR-TJ]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=50989 ABTJ_RS01610 WP_001046420.1 347595..348077(+) (pilY2) [Acinetobacter baumannii MDR-TJ]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
97.5 |
100 |
0.975 |
| comE | Acinetobacter baylyi ADP1 |
40.116 |
100 |
0.431 |