Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I5M59_RS07690 Genome accession   NZ_CP065457
Coordinates   1636408..1637004 (+) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain Magic conch shell     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1631408..1642004
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I5M59_RS07670 (I5M59_07670) - 1631601..1633358 (-) 1758 WP_004147851.1 Lon protease family protein -
  I5M59_RS07675 (I5M59_07675) matP 1633544..1633996 (+) 453 WP_002898404.1 macrodomain Ter protein MatP -
  I5M59_RS07680 (I5M59_07680) ompA 1634127..1635197 (-) 1071 WP_002898408.1 porin OmpA -
  I5M59_RS07685 (I5M59_07685) sulA 1635550..1636059 (-) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  I5M59_RS07690 (I5M59_07690) sxy/tfoX 1636408..1637004 (+) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  I5M59_RS07695 (I5M59_07695) yccS 1637018..1639153 (-) 2136 WP_002898422.1 YccS family putative transporter -
  I5M59_RS07700 (I5M59_07700) - 1639171..1639617 (-) 447 WP_004224032.1 YccF domain-containing protein -
  I5M59_RS07705 (I5M59_07705) helD 1639742..1641796 (+) 2055 WP_004224033.1 DNA helicase IV -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=509805 I5M59_RS07690 WP_004179217.1 1636408..1637004(+) (sxy/tfoX) [Klebsiella pneumoniae strain Magic conch shell]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=509805 I5M59_RS07690 WP_004179217.1 1636408..1637004(+) (sxy/tfoX) [Klebsiella pneumoniae strain Magic conch shell]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGAAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51