Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   KU497_RS12950 Genome accession   NZ_CP077880
Coordinates   2555742..2556542 (-) Length   266 a.a.
NCBI ID   WP_000088648.1    Uniprot ID   A0A0H2XG71
Organism   Staphylococcus aureus strain 356     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2550742..2561542
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU497_RS14850 - 2550762..2551271 (-) 510 WP_413243637.1 restriction endonuclease subunit S -
  KU497_RS14855 - 2551379..2551514 (-) 136 Protein_2510 restriction endonuclease subunit S -
  KU497_RS14860 - 2551488..2552006 (-) 519 Protein_2511 restriction endonuclease subunit S -
  KU497_RS14865 - 2552056..2552142 (-) 87 Protein_2512 hypothetical protein -
  KU497_RS12940 (KU497_12910) rlmH 2552349..2552828 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  KU497_RS12945 (KU497_12915) adsA 2553196..2555514 (-) 2319 WP_050956466.1 LPXTG-anchored adenosine synthase AdsA -
  KU497_RS12950 (KU497_12920) vicX 2555742..2556542 (-) 801 WP_000088648.1 MBL fold metallo-hydrolase Regulator
  KU497_RS12955 (KU497_12925) - 2556932..2557720 (-) 789 WP_001104172.1 two-component system regulatory protein YycI -
  KU497_RS12960 (KU497_12930) yycH 2557721..2559055 (-) 1335 WP_001060131.1 two-component system activity regulator YycH -
  KU497_RS12965 (KU497_12935) walK 2559048..2560874 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30327.55 Da        Isoelectric Point: 6.3392

>NTDB_id=509724 KU497_RS12950 WP_000088648.1 2555742..2556542(-) (vicX) [Staphylococcus aureus strain 356]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAAHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=509724 KU497_RS12950 WP_000088648.1 2555742..2556542(-) (vicX) [Staphylococcus aureus strain 356]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGAAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAAACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGCTCATGCAATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGACAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XG71

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.416

96.617

0.477