Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   I6Z21_RS10325 Genome accession   NZ_CP065436
Coordinates   2068195..2068791 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain Dirty Dan     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2063195..2073791
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6Z21_RS10310 (I6Z21_10310) helD 2063403..2065457 (-) 2055 WP_194428715.1 DNA helicase IV -
  I6Z21_RS10315 (I6Z21_10315) - 2065582..2066028 (+) 447 WP_004224032.1 YccF domain-containing protein -
  I6Z21_RS10320 (I6Z21_10320) yccS 2066046..2068181 (+) 2136 WP_004213263.1 YccS family putative transporter -
  I6Z21_RS10325 (I6Z21_10325) sxy/tfoX 2068195..2068791 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  I6Z21_RS10330 (I6Z21_10330) sulA 2069140..2069649 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  I6Z21_RS10335 (I6Z21_10335) ompA 2070002..2071072 (+) 1071 WP_002898408.1 porin OmpA -
  I6Z21_RS10340 (I6Z21_10340) matP 2071203..2071655 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  I6Z21_RS10345 (I6Z21_10345) - 2071841..2073598 (+) 1758 WP_004147851.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=509661 I6Z21_RS10325 WP_004150836.1 2068195..2068791(-) (sxy/tfoX) [Klebsiella pneumoniae strain Dirty Dan]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=509661 I6Z21_RS10325 WP_004150836.1 2068195..2068791(-) (sxy/tfoX) [Klebsiella pneumoniae strain Dirty Dan]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCTAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51